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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0954
         (843 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1...    39   8e-04
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc...    38   0.002
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po...    37   0.003
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch...    36   0.007
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ...    33   0.038
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac...    33   0.067
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1...    31   0.15 
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha...    31   0.15 
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac...    31   0.15 
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb...    31   0.20 
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo...    31   0.20 
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc...    30   0.47 
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe...    29   0.62 
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe...    29   0.82 
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa...    29   1.1  
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa...    28   1.4  
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb...    28   1.4  
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom...    28   1.4  
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha...    28   1.9  
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces...    28   1.9  
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom...    28   1.9  
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c...    28   1.9  
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom...    28   1.9  
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||...    27   2.5  
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p...    27   3.3  
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc...    27   3.3  
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c...    27   3.3  
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc...    27   3.3  
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar...    27   4.4  
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo...    26   5.8  
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom...    26   5.8  
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S...    26   5.8  
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy...    26   7.7  

>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
           Prw1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 431

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = +3

Query: 30  AVLQDMHIKCFDTRT-DCS-KPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
           +V  D ++   D R  D S KP+ S+ +AH   +  + FNP+  F LA+   D  + +WD
Sbjct: 252 SVSYDQYLHVHDIRRPDASTKPARSV-HAHSGPIHSVAFNPHNDFILATCSTDKTIALWD 310

Query: 204 YRNGKEPIFNRTDH 245
            RN  + +     H
Sbjct: 311 LRNLNQRLHTLEGH 324



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           H     D+D+ PN  + +A+A +D  L IW
Sbjct: 381 HTSCTIDMDWCPNYNWTMATAAEDNILQIW 410



 Score = 27.9 bits (59), Expect = 1.9
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 3   NPHQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDD 182
           NPH          D  I  +D R + ++   +++  H  +V  + F+P+ +  LAS   D
Sbjct: 290 NPHNDFILATCSTDKTIALWDLR-NLNQRLHTLEG-HEDIVTKISFSPHEEPILASTSAD 347

Query: 183 AALNIWD 203
               +WD
Sbjct: 348 RRTLVWD 354


>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 430

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = +3

Query: 30  AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
           +V  D  ++  DTR +  + +  +  AH + +  +  NP   + LA+A  D  + +WD R
Sbjct: 253 SVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLR 312

Query: 210 NGKEPIFNRTDH 245
           N  + +     H
Sbjct: 313 NPYQRLHTLEGH 324



 Score = 32.7 bits (71), Expect = 0.067
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
           H  +V D+ F+P  +  LAS  DD  L I D R   E
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPE 270



 Score = 30.7 bits (66), Expect = 0.27
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 404 LQSYEQHEDSVYCSEWSTVEPWTFASLSYDARLVI 508
           L + E HED VY  EWS  +    AS S D R+ I
Sbjct: 318 LHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCI 352


>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 556

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 24/69 (34%), Positives = 39/69 (56%)
 Frame = +3

Query: 39  QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           +D HI   D R    +  + +  AHRQ V  L++N N    LAS G+D AL +WD +  +
Sbjct: 351 RDNHILHRDVRAP--EHYFRVLTAHRQEVCGLEWNSNENL-LASGGNDNALMVWD-KFEE 406

Query: 219 EPIFNRTDH 245
           +P+++  +H
Sbjct: 407 KPLYSFHNH 415


>SPAC343.17c |||WD repeat protein, human WDR70
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 576

 Score = 35.9 bits (79), Expect = 0.007
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   NPHQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAH--RQLVRDLDFNPNRQFHLASAG 176
           NP +       + D  I+ +   +   +P   I +AH  +Q +  L F+ +  + L S G
Sbjct: 259 NPAKPDNFATAVLDGSIQFWQKGSRTKRPVMKIKDAHLPQQGISCLSFSQDGNY-LLSRG 317

Query: 177 DDAALNIWDYRNGKEPIFNRTD 242
           +D AL +WD RN  + +  R D
Sbjct: 318 EDNALRVWDLRNSNKCVNERID 339


>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 509

 Score = 33.5 bits (73), Expect = 0.038
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 99  IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
           I  AH   VRD+ F+PN      +A DD +L +W++    E +
Sbjct: 159 IVQAHEMEVRDVAFSPN-DSKFVTASDDGSLKVWNFHMSTEEL 200


>SPAC18B11.10 |tup11||transcriptional corepressor
           Tup11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 614

 Score = 32.7 bits (71), Expect = 0.067
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +3

Query: 39  QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           +D  IK +D  T   +  +S    H Q +  LDF+ N +F ++ +GD  A  +WD   G+
Sbjct: 380 EDRQIKLWDLSTQKVRYVFS---GHEQDIYSLDFSHNGRFIVSGSGDRTA-RLWDVETGQ 435


>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
           Pop1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 775

 Score = 31.5 bits (68), Expect = 0.15
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
 Frame = +3

Query: 9   HQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNA--------HRQLVRDLDFNPNRQFHL 164
           H G      +     +C    TD     W++++         H  LV  + FN N     
Sbjct: 616 HVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVS- 674

Query: 165 ASAGDDAALNIWDYRNG 215
           ASA  D +L +WD   G
Sbjct: 675 ASAPPDTSLRVWDLNTG 691



 Score = 28.7 bits (61), Expect = 1.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           H   V  +  NP+RQ    SAG DA + IW+  +G+
Sbjct: 616 HVGRVYSVTINPSRQ-QCISAGTDAKIRIWNLESGE 650


>SPAC4F8.11 |||WD repeat protein, human WDR24
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 846

 Score = 31.5 bits (68), Expect = 0.15
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
           AH  +V  ++++PN  F LAS G D  + IWD  + K+
Sbjct: 219 AHNGVVLCVNYSPNGVF-LASCGRDKTIRIWDSTSNKK 255



 Score = 29.9 bits (64), Expect = 0.47
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
           N H + V  LD +     ++ +A  D  + +WDY+     I
Sbjct: 131 NEHSRAVHKLDISSFHPSYVLTASQDGLIKLWDYKESSSTI 171



 Score = 29.9 bits (64), Expect = 0.47
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 39  QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           QD  IK +D +   S  ++     + +  RD+ F+P+      +A D   L  WD R  K
Sbjct: 155 QDGLIKLWDYKESSSTITF---RGNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPK 211

Query: 219 EPIFNRTDHS 248
            P      H+
Sbjct: 212 LPFLKLAAHN 221


>SPAC23C4.02 |crn1||actin binding protein, coronin
           Crn1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 601

 Score = 31.5 bits (68), Expect = 0.15
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           H   V D D+NP     LAS GDD+ + IW
Sbjct: 80  HTAAVLDTDWNPFHDQVLASGGDDSKIMIW 109


>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1207

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           + H   VR + F+P +   + S GDD  +N+W+Y++ K
Sbjct: 50  DGHDGPVRGIAFHPTQPLFV-SGGDDYKVNVWNYKSRK 86


>SPAC25H1.06 |||histone acetyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 408

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 57  CFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           C+    + + P   +   H+  V ++DF+P     +AS  DD  L+IW
Sbjct: 354 CYVWNFNKANPLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIW 401


>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
           Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 29.9 bits (64), Expect = 0.47
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRN 212
           + H + V  + +NP   +  ASAGDD  + IW  ++
Sbjct: 467 SGHVKCVNYVAYNPVDPYQFASAGDDNTVRIWSNKD 502


>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 516

 Score = 29.5 bits (63), Expect = 0.62
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = +2

Query: 272 NSYHEQLLLTGSSD--GRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDSVYCS 445
           +SYH   +L  SS+     LL + ++      D + K   +     ++S+  H D V C 
Sbjct: 250 DSYHTDAVLALSSNRNAHNLLVSGSA------DTTLKLWDLSTCNCVKSFTYHSDKVSCL 303

Query: 446 EWSTVEPWTFASLSYDARLVIRE-SLDRSNTNF 541
           +W +  P    S SYD    I +  L+ + ++F
Sbjct: 304 DWYSKAPSVLLSGSYDKTAKIADLRLEEAPSSF 336


>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 488

 Score = 29.1 bits (62), Expect = 0.82
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 162 LASAGDDAALNIWDYRNGKEPIFNRTDHS 248
           LAS G+D  + IWD R+   P F +T+H+
Sbjct: 319 LASGGNDNVVQIWDARS-SIPKFTKTNHN 346


>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
           Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 421

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 162 LASAGDDAALNIWDYRNGKEPIFNRTDHS 248
           LAS G+D  L +WDYR+ + P+    +H+
Sbjct: 264 LASGGNDNNLFVWDYRSSR-PLHKFEEHT 291


>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
           Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 527

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 139 KSRSRTNCLCALSMLQDGFEQSVRVSKHFMCISCRTAN 26
           +S S  +C C  +   + + QS    K+ +CISC   N
Sbjct: 230 QSDSPQHCYCCGNKFNESYYQSQTAQKYNVCISCYQQN 267


>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 736

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           H+  VR L  + +  + LAS GDD  L IW+   G+
Sbjct: 378 HKGRVRCLSVHVSGNW-LASGGDDGVLRIWEVMTGR 412


>SPAC25H1.08c |||ribosome biogenesis protein
           Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 399

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           H Q V D  F PN  + L +A  D  +  WD R+G+
Sbjct: 325 HEQAVIDCKFLPNTPY-LLTACADCVIRKWDVRSGQ 359


>SPBC609.03 |||WD repeat protein, human IQWD1
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 809

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEP 224
           H   V  LD++ + +F L S  DD  L +WD  N  +P
Sbjct: 44  HTGCVNTLDWSADGEF-LLSGSDDTRLIVWDVFNEYKP 80


>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 796

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 42  DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 206
           DM IKCF+   D S         H + V  L  NP      AS+  D  + +W +
Sbjct: 119 DMTIKCFNW--DMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSF 171



 Score = 27.1 bits (57), Expect = 3.3
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 108 AHRQLVRDLDFNP-NRQFHLASAGDDAALNIWDYR 209
           AH + V  +++ P   + +L +AGDD  + +WDY+
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQ 216


>SPBC32F12.02 |rec14||recombination protein
           Rec14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 302

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 254
           + H   VR + F+P     LA+AGD   + I+D  +G + +     H+ W
Sbjct: 184 SGHTSPVRSVAFSPGSTL-LAAAGDSKMITIYDVLSG-DQVGQLRGHAAW 231


>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 502

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 254
           N H   +    F+P+    L +   D    +WD  + + PI     H++W
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC-DTQTPIATMKGHTNW 179


>SPBC1A4.07c |||U3 snoRNP-associated protein
           Sof1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 436

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +3

Query: 42  DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
           D  I  +D RT  S P   +    R     + +NP   F+  +  +D  L ++D RN K 
Sbjct: 209 DRSIVIYDLRT--SSPLTKLITKLR--TNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKR 264

Query: 222 PIFNRTDH 245
            +    DH
Sbjct: 265 ALHVYKDH 272


>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 404

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
           + H   V  +D+ P  +F LAS   D    +WD R
Sbjct: 186 SGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIR 220


>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 309

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
           AH      ++F+P+ + HLA  G DA  ++WD
Sbjct: 192 AHNSNCFCIEFSPDNR-HLAIGGADAITSLWD 222


>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 488

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           H   V+ L F  N  + + +  DD+ + IWD R  +
Sbjct: 374 HSSPVKTLQFGENGYWLVVTTNDDSDIFIWDLRKSE 409


>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1077

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 281 HEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDSVY 439
           +EQ++   + D  GL+Y+   +       SE+T  IL D    S++  ED+ Y
Sbjct: 119 YEQVIFQWNCDNEGLVYSQDGVPLQAFSGSERTDFILPD----SWKTTEDTFY 167


>SPBC17D11.08 |||WD repeat protein, human WDR68
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 435

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
           H+  V  + + P  +  LA+ GDD  +++WD
Sbjct: 314 HKGDVNAVKWMPGSKSKLATCGDDCVVSLWD 344


>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
           Pop2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 703

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 159 HLASAGDDAALNIWDYRNGKEPIFNRTD 242
           H   +G+D ++ +WD R GK   F  TD
Sbjct: 640 HKIISGNDGSVKLWDVRTGKLLRFLLTD 667


>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 651

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNG 215
           H   +  L F+ N   HL S   D ++ IWD R+G
Sbjct: 535 HTAPISSLQFDSN---HLYSGSYDNSVRIWDLRSG 566


>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 380

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 159 HLASAGDDAALNIWDY 206
           +LASA DD  + IWD+
Sbjct: 110 YLASASDDKTIRIWDF 125


>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 462

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 162 LASAGDDAALNIWDYRNGK 218
           ++S G+DA   IWD R+GK
Sbjct: 322 VSSGGNDAIGRIWDLRSGK 340


>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 314

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTD-HSHW 254
           AH++ +     +P+ + HLA+   DA +NIW   +    +  R   H  W
Sbjct: 213 AHQRYITRCVLSPDVK-HLATCSADATVNIWSTEDMSFMLERRLQGHQRW 261


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,113,867
Number of Sequences: 5004
Number of extensions: 61434
Number of successful extensions: 291
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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