SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0954
         (843 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_33239| Best HMM Match : No HMM Matches (HMM E-Value=.)              65   6e-11
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)               43   3e-04
SB_53276| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.031
SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34)                  36   0.031
SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20)                  34   0.17 
SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07)                    33   0.22 
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.38 
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)                  32   0.67 
SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)                   32   0.67 
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.67 
SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.89 
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)                  31   1.5  
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.5  
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.5  
SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05)                   30   2.0  
SB_54574| Best HMM Match : WD40 (HMM E-Value=0)                        30   2.0  
SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.0  
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.7  
SB_53453| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_23364| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)                    29   3.6  
SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18)           29   4.7  
SB_17098| Best HMM Match : WD40 (HMM E-Value=8.9e-32)                  29   4.7  
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)                  29   4.7  
SB_7939| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   6.2  
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.2  
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)                  29   6.2  
SB_30771| Best HMM Match : WD40 (HMM E-Value=2e-06)                    29   6.2  
SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14)                  28   8.2  
SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)                  28   8.2  
SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  

>SB_33239| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 96

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +2

Query: 353 DPDDDSEKTGKI--LEDGVLQSYEQHEDSVYCSEWSTVEPWTFASLSYDAR 499
           D D+D    G      DGV+ SY++HEDSVY  EWST +PW FASLSYD +
Sbjct: 16  DEDEDQRDKGSSGPASDGVIASYDEHEDSVYAVEWSTADPWVFASLSYDVQ 66


>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 475

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +3

Query: 30  AVLQDMHIKCFDTR-TDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 206
           +V  D  +  +DTR T+ +K + ++D AH   V  L FNP  +F LA+   D  + +WD 
Sbjct: 293 SVADDHKLMIWDTRQTNSNKAAHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDL 351

Query: 207 RNGKEPIFNRTDH 245
           RN K  + +   H
Sbjct: 352 RNLKLKLHSFESH 364



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 63  DTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNG 215
           D   +CS P   +   H +    L +NPN   +L SA DD  + +WD  +G
Sbjct: 228 DPNGECS-PDLRL-KGHTKEGYGLSWNPNVNGNLLSASDDHTICLWDISSG 276



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
           +H+  +  + ++P+ +  LAS+G D  L++WD
Sbjct: 363 SHKDEIFQVQWSPHNETILASSGTDRRLHVWD 394



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 99  IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           I   H   + D  +NPN  + L S  +D  + +W
Sbjct: 417 IHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW 450


>SB_53276| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 424

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 51  IKCFDTRTDCSKPSWS-IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
           +K +D R   +KPS + + +  R  +  +D +P +   LA+ G D  L+IWD R  + P+
Sbjct: 175 VKMWDLRNRNNKPSRTMLLSGDRVPLLCVDKHPTQPHLLAAGGQDGVLSIWDMRQEQYPV 234

Query: 228 FNRTDHS 248
                HS
Sbjct: 235 TLLEGHS 241


>SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34)
          Length = 292

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHS 248
           HRQ V  L ++P+ Q HLAS G+D  L +W+  +G  PI   ++H+
Sbjct: 145 HRQEVCGLKWSPDHQ-HLASGGNDNKLLVWNL-SGSTPIQQYSEHT 188


>SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20)
          Length = 215

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 254
           AH   V  + F  +R F   S  DD  + +WD RN K  +F+   H+ W
Sbjct: 110 AHSDCVNCVRFLDSRSFLTCS--DDKTICLWDARNLKSNVFSLVGHTSW 156


>SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07)
          Length = 711

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 60  FDTRTDCSKPSWS-IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNR 236
           +D R   +KPS + + +  R  +  +D +P +   LA+ G D  L+IWD R  + P+   
Sbjct: 2   WDLRNRNNKPSRTMLLSGDRVPLLCVDKHPTQPHLLAAGGQDGVLSIWDMRQEQYPVTLL 61

Query: 237 TDHS 248
             HS
Sbjct: 62  EGHS 65


>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
           N H   V+ LDFNP +   LAS   D+ + IWD  +  E
Sbjct: 120 NKHSGAVQALDFNPFQPNLLASGASDSEIFIWDMNSPGE 158


>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
          Length = 195

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 206
           AH++ VR L F+P    + AS  DD  + IWD+
Sbjct: 111 AHKEPVRGLSFSPTDNKY-ASCADDGLVKIWDF 142


>SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)
          Length = 539

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 27  FAVLQDM--HIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           FA++ D   H+  F+ ++   + S+    AH+  VR +  +   Q  L SAG D+ L  W
Sbjct: 339 FAIIGDSKGHVDSFNIQSGNHRASYGNPRAHKGCVRGVAIDGVNQ-QLLSAGADSQLRFW 397

Query: 201 DYRNGK 218
            +   K
Sbjct: 398 SFTKRK 403


>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 96  SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 254
           ++  AH   VR +DF+ + Q  L +A DD +L +W     K  +++   H +W
Sbjct: 22  TVFKAHTATVRSVDFSGDGQ-SLLTASDDKSLKVWTVHRQKF-LYSLNAHMNW 72


>SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 117 QLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           Q +R L F+  ++  LAS  DD A N+WD  + K
Sbjct: 126 QAIRGLQFSHFKKALLASVSDDGASNLWDTNSRK 159


>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
          Length = 453

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           HR+ +  + +NP+ +  LASAG D  + IW  +  K
Sbjct: 60  HRKTITAIAWNPHNEDILASAGADCRVLIWSIKEQK 95


>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1480

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFN 233
           AH   V  LD++P  +  +A+ G D  + +WD +    P+ N
Sbjct: 419 AHNGPVFTLDWHPEDRNWIATGGRDKCVKVWDVQGKATPVNN 460


>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 482

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
           H Q V  L ++P+ ++ LAS G+D  LNIWD
Sbjct: 290 HTQEVCGLKWSPDGKY-LASGGNDNLLNIWD 319


>SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 525

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           N H + V DL +NP     +ASA +D ++ IW
Sbjct: 83  NGHTRPVLDLGWNPFDDNVIASASEDCSIKIW 114


>SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05)
          Length = 375

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +3

Query: 51  IKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIF 230
           + C D RTD   P ++I NAH   +  L  +      L +A  D  + +WD ++ K    
Sbjct: 218 VYCCDVRTDA--PVFTI-NAHDSAIAGLVLSSQVPNCLVTASADGNMKVWDIKDNKPSFI 274

Query: 231 NRTDHSHWC 257
              D    C
Sbjct: 275 LTRDMQMKC 283


>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 1050

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 111  HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
            H  +VR + F+P+    + +  DD  + IWD  +GKE
Sbjct: 968  HPDVVRSISFSPDNM--ICTGCDDGIVRIWDSVSGKE 1002



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +3

Query: 42  DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
           D  +K +D++T      + +  AH  +VR   F+P+    +AS  DD  + IW+  +G++
Sbjct: 615 DRTVKVWDSKTGVC---YHVYMAHTDIVRWCCFSPDGG-KVASCSDDNTVRIWEASSGED 670


>SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 335

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +3

Query: 96  SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
           ++   H  +   + F P+R + L S G D  +  WD+ +G+
Sbjct: 132 TLSRVHTNICSTVQFRPHRPWGLVSGGMDYRVAHWDFSSGR 172


>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2332

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
 Frame = +2

Query: 305  SSDGRGLLYAAASICR----DPDDDSEKTGKILEDGVLQSYEQHEDSVYCSEWSTVEPWT 472
            SSD  G +YA A        D DDD +    +L DGV+ ++    D  Y    S   P  
Sbjct: 1773 SSDADGDIYATAFSPNNDDGDNDDDDDNGSYVLSDGVIDTFT--SDETYDERMS---PKQ 1827

Query: 473  FASLSYDARLVIRESLDRSN 532
             A  S    + I E LD  N
Sbjct: 1828 HALSSPSPSITISEELDIKN 1847


>SB_53453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 192

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 210 SYSPICSALRHHPRWPGGTGDS 145
           S SP+C+ LR HP    G GDS
Sbjct: 56  SLSPLCALLRDHPGTRSGIGDS 77


>SB_23364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 184

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 278 SCCILPSTPVRVIGSVEYRLFPVPI 204
           SCC++P  PV VI ++   +FP+ +
Sbjct: 21  SCCVIPFAPVTVICTLRLIVFPISL 45


>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
          Length = 515

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
           H+ +V  + FNP     L SA DD  L +W  R
Sbjct: 476 HQNVVNCVAFNPRDPDMLVSASDDHTLRVWKSR 508


>SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18)
          Length = 1076

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 302 QSTVTVRGSCCILPSTPVRVIGSVEYRLFPVPIVPYVQRCVITRAG 165
           Q+   V+ S C+ P+T +  +GS ++ L+ + I   V  C I   G
Sbjct: 859 QTHAPVKSSPCVDPTTGLVWVGSHDHHLYALDITNRVSACAIDCGG 904


>SB_17098| Best HMM Match : WD40 (HMM E-Value=8.9e-32)
          Length = 808

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFH--LASAGDDAALNIWDYRNGKEPIFNRTDHS 248
           AH   V  ++F+P +  H  LASAG D  ++I+D       I    DHS
Sbjct: 394 AHESEVLCVEFSPPQSGHKLLASAGRDRLIHIFDMNKDFSLIQTLDDHS 442


>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
          Length = 1093

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD-YRNG 215
           AH   V  LD+NP     LAS   D ++ +WD Y NG
Sbjct: 202 AHTSGVNRLDWNPVYTNLLASCSMDNSVRVWDTYLNG 238


>SB_7939| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 289

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 3   NPHQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFN 143
           +PHQG+   +   D  IK +DT T    P  +I++ H +    LDFN
Sbjct: 150 SPHQGNIIASCSYDFTIKTWDT-TSTLAPLETIEH-HSEFATGLDFN 194


>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1855

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 99  IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 200
           I   H   + D  +NPN  + L S  +D  + +W
Sbjct: 897 IHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW 930


>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
          Length = 685

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 206
           H Q V  L ++P+ +  LAS G+D  +NIW Y
Sbjct: 470 HSQEVCGLKWSPDGKL-LASGGNDNVVNIWPY 500


>SB_30771| Best HMM Match : WD40 (HMM E-Value=2e-06)
          Length = 229

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
           N     +RDL FN N+  HLA+    A ++IWD  + K+
Sbjct: 71  NLSTNRIRDLAFN-NKTGHLAALSPLAFIHIWDMISEKQ 108


>SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14)
          Length = 316

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 138 FNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
           FNP  ++HL+    D  ++ +D R+  +PI
Sbjct: 110 FNPESRYHLSFGSADHCVHYYDLRHAAKPI 139


>SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)
          Length = 256

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 206
           H   +  + F+P+    LAS G D A+ +WD+
Sbjct: 180 HTDTIHTMSFSPDGTL-LASGGMDGAVRVWDF 210


>SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 138 FNPNRQFHLASAGDDAALNIWDYRNGK 218
           F+PN ++ LA+  D+  L +WDY  GK
Sbjct: 130 FSPNGKYILAATLDNT-LKLWDYSKGK 155


>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 297

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = +3

Query: 48  HIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
           HI+ +D  +    P  S D   +  V  + F+ + ++ + + G+D++  IWD R  K+  
Sbjct: 61  HIRLYDINSANPNPVVSYDGVSKN-VTAVGFHEDGKW-MFTGGEDSSARIWDLR--KQID 116

Query: 228 FNRT 239
           F+RT
Sbjct: 117 FSRT 120


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,504,494
Number of Sequences: 59808
Number of extensions: 453604
Number of successful extensions: 1346
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -