Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0954
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 89 4e-18
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 39 0.005
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 39 0.005
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 39 0.005
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 36 0.048
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 35 0.063
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.063
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 35 0.063
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 34 0.15
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 33 0.34
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 32 0.44
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 32 0.59
U22831-9|AAN63388.1| 412|Caenorhabditis elegans Hypothetical pr... 31 1.0
U22831-8|AAK20070.2| 545|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 31 1.0
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 31 1.4
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 30 1.8
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 29 3.1
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 29 5.5
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 29 5.5
Z73973-6|CAA98268.2| 189|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z71185-13|CAD54125.1| 189|Caenorhabditis elegans Hypothetical p... 28 7.2
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 9.5
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 9.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 9.5
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL117193-11|CAB55000.1| 174|Caenorhabditis elegans Hypothetical... 28 9.5
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 28 9.5
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 9.5
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 89.0 bits (211), Expect = 4e-18
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 9/94 (9%)
Frame = +2
Query: 254 VWTVRYNSYHEQLLLTGSSDGRGLLYAAASIC-------RDPDDDSEKTGKI--LEDGVL 406
VW+VR++ H+QLLLTG SD +L A S+ RD +++ E + L+DG L
Sbjct: 255 VWSVRFHPVHDQLLLTGGSDASVVLSCAQSVSSEQQIEFRDDEEEEEDDDLVEKLQDGQL 314
Query: 407 QSYEQHEDSVYCSEWSTVEPWTFASLSYDARLVI 508
+ ++HEDSVY WS+ +PWTFASLSYD R+++
Sbjct: 315 ERIDEHEDSVYACAWSSADPWTFASLSYDGRMIV 348
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +3
Query: 3 NPHQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDD 182
+PH V C D RTD I +AH +DFNPN Q +A+ GDD
Sbjct: 173 SPHHDGNMLGVTGGRTAWCIDCRTD--NEYLKIRDAHIHRTISMDFNPNLQHVIATCGDD 230
Query: 183 AALNIWDYRNGKEPIFNRTDHSHW 254
+ IWD R+ + + H+HW
Sbjct: 231 GYVRIWDTRSTSSALTSLHPHAHW 254
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +3
Query: 30 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
+V D + +D RT S P ID AH V L FNP +F LA+ D + +WD R
Sbjct: 240 SVGDDKKLLIWDVRT--STPGHCID-AHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 210 NGKEPIFNRTDH 245
N + + + H
Sbjct: 297 NLRMKLHSFESH 308
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
+HR + + ++P+ + LAS+G D L++WD
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = +2
Query: 254 VWTVRYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDS 433
++ V+++ ++E +L + +D R ++ + I D + + G +L + H
Sbjct: 312 IFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGP---PELLFIHGGHTAK 368
Query: 434 VYCSEWSTVEPWTFASLSYDARLVIRESLD 523
+ W+ EPW S+S D L + + D
Sbjct: 369 ISDFSWNPNEPWVVCSVSEDNILQVWQMAD 398
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 99 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTD 242
I H + D +NPN + + S +D L +W + I+N D
Sbjct: 361 IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADN---IYNEVD 405
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +3
Query: 30 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
+V D + +D RT S P ID AH V L FNP +F LA+ D + +WD R
Sbjct: 240 SVGDDKKLLIWDVRT--STPGHCID-AHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 210 NGKEPIFNRTDH 245
N + + + H
Sbjct: 297 NLRMKLHSFESH 308
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
+HR + + ++P+ + LAS+G D L++WD
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = +2
Query: 254 VWTVRYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDS 433
++ V+++ ++E +L + +D R ++ + I D + + G +L + H
Sbjct: 312 IFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGP---PELLFIHGGHTAK 368
Query: 434 VYCSEWSTVEPWTFASLSYDARLVIRESLD 523
+ W+ EPW S+S D L + + D
Sbjct: 369 ISDFSWNPNEPWVVCSVSEDNILQVWQMAD 398
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 99 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTD 242
I H + D +NPN + + S +D L +W + I+N D
Sbjct: 361 IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADN---IYNEVD 405
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +3
Query: 30 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
+V D + +D RT S P ID AH V L FNP +F LA+ D + +WD R
Sbjct: 240 SVGDDKKLLIWDVRT--STPGHCID-AHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 210 NGKEPIFNRTDH 245
N + + + H
Sbjct: 297 NLRMKLHSFESH 308
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
+HR + + ++P+ + LAS+G D L++WD
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = +2
Query: 254 VWTVRYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDS 433
++ V+++ ++E +L + +D R ++ + I D + + G +L + H
Sbjct: 312 IFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGP---PELLFIHGGHTAK 368
Query: 434 VYCSEWSTVEPWTFASLSYDARLVIRESLD 523
+ W+ EPW S+S D L + + D
Sbjct: 369 ISDFSWNPNEPWVVCSVSEDNILQVWQMAD 398
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 99 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTD 242
I H + D +NPN + + S +D L +W + I+N D
Sbjct: 361 IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADN---IYNEVD 405
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +3
Query: 39 QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
+D I D R D + + N HRQ V L ++P++Q LAS G+D L +W+ R
Sbjct: 498 RDRTIMHRDIRCDDNDMGRKLTN-HRQEVCGLKWSPDKQL-LASGGNDNQLLVWNLRR-N 554
Query: 219 EPIFNRTDHS 248
EPI T H+
Sbjct: 555 EPIQTYTQHN 564
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +2
Query: 254 VWTVRYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDS 433
++ V ++ ++E +L + SD R +++ + I +DP S + + V+ + H
Sbjct: 311 IFQVSFSPHYETVLASSGSDDRVIVWDISKI-QDPSSSSAASSDSVPPEVIFIHAGHTGK 369
Query: 434 VYCSEWSTVEPWTFAS 481
V W+ PWT S
Sbjct: 370 VADFSWNPNRPWTICS 385
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
H D+ F+ F S GDD LN+WD R K
Sbjct: 220 HSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSK 255
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 30 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
+V D + +D R SKP + H V + FNP ++ LA+ D + +WD R
Sbjct: 239 SVGDDRKLNLWDLRQ--SKPQLTAVG-HTAEVNCITFNPFSEYILATGSVDKTVALWDMR 295
Query: 210 NGKEPIFNRTDHS 248
N ++ ++ H+
Sbjct: 296 NMRKKMYTLKHHN 308
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 99 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRN 212
I H V D +NPNR + + S+ + AL +W+ N
Sbjct: 362 IHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSN 399
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEP 224
H + + F+P+ + LAS+G D + +WD ++P
Sbjct: 307 HNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDP 344
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 42 DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
D I+ FD T ++ AH +R L +P + L SA DD + +WD+ N
Sbjct: 170 DQQIRIFDAETFSLINEFT---AHSDFIRSLTVHPTLPY-LISASDDRKIRVWDWENEWR 225
Query: 222 PIFNRTDHSHW 254
+H+H+
Sbjct: 226 MEQEFQEHAHY 236
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 90 SWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
S ++ H+ V + FN + + + S+ DDA + IWD RN + P+
Sbjct: 357 SVAVFQGHQDSVTSVSFNTD--YRIVSSSDDATVKIWDLRNMRTPL 400
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 90 SWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
S ++ H+ V + FN + + + S+ DDA + IWD RN + P+
Sbjct: 355 SVAVFQGHQDSVTSVSFNTD--YRIVSSSDDATVKIWDLRNMRTPL 398
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 15 GHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALN 194
G T+FA + F + + P SI N H + L F+P + HL S GDDA +
Sbjct: 265 GGTRFAS-SSASSQIFIWHIEMTTPIMSITNEHTSTISALSFSPTSR-HLLSGGDDAMIL 322
Query: 195 IW 200
I+
Sbjct: 323 IY 324
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 15 GHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALN 194
G T+FA + F + + P SI N H + L F+P + HL S GDDA +
Sbjct: 201 GGTRFAS-SSASSQIFIWHIEMTTPIMSITNEHTSTISALSFSPTSR-HLLSGGDDAMIL 258
Query: 195 IW 200
I+
Sbjct: 259 IY 260
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 15 GHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALN 194
G T+FA + F + + P SI N H + L F+P + HL S GDDA +
Sbjct: 265 GGTRFAS-SSASSQIFIWHIEMTTPIMSITNEHTSTISALSFSPTSR-HLLSGGDDAMIL 322
Query: 195 IW 200
I+
Sbjct: 323 IY 324
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 63 DTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
D R C+ P + N H + L + P+ H+ +AGDD IWD +PI
Sbjct: 387 DLRLPCT-PVARLRN-HEATINGLSWAPHSGSHICTAGDDYQALIWDVHEMPKPI 439
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 42 DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNG 215
D I ++ +C ++++ H+ + ++ FN + HL SAG D + +WD G
Sbjct: 57 DQQIFLWNVFGECE--NFAVLKGHKGAIMEVKFNADSS-HLVSAGTDKTVRVWDMETG 111
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 90 SWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRT 239
++ + AH + + F+P+ + L S G D L +W N KEP+ +T
Sbjct: 317 NYLVRKAHNGSITSIAFSPDSK-RLLSRGFDDTLKMWSLDNPKEPLLVKT 365
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 96 SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
+I H V ++FNP + S DD +L +W+ + K
Sbjct: 218 NITKGHTATVNCVEFNPLNKNEFISCSDDGSLRLWNLDDHK 258
>U22831-9|AAN63388.1| 412|Caenorhabditis elegans Hypothetical
protein F47D12.9b protein.
Length = 412
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 162 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWCGR 263
+ + G D+ + IWD+R K P+ HS+ C R
Sbjct: 301 VVTEGFDSIIRIWDFRWPKNPMMEMHGHSNNCNR 334
>U22831-8|AAK20070.2| 545|Caenorhabditis elegans Hypothetical
protein F47D12.9a protein.
Length = 545
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 162 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWCGR 263
+ + G D+ + IWD+R K P+ HS+ C R
Sbjct: 434 VVTEGFDSIIRIWDFRWPKNPMMEMHGHSNNCNR 467
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 81 SKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
+K S + H QLV + F+P+ ++ +ASA D ++ +W R GK
Sbjct: 349 TKQSINRMTGHMQLVNQVVFSPDTRY-IASASFDKSVKLWCGRTGK 393
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 410 SYEQHEDSVYCSEWSTVEPWTFASLSYDARLVI 508
S+E H D V WS V P FAS+ D + +
Sbjct: 526 SFESHPDLVLDVAWSPVHPAVFASIDADGNIFV 558
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 227
H V + + P+ H+ +AGDD+ IWD + P+
Sbjct: 311 HTGPVNGIAWAPHSPHHICTAGDDSQALIWDLQQVPRPV 349
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 3 NPHQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDD 182
+P++ T F+ +D +K ++ S+ + +AHR LV D+ + N + + G D
Sbjct: 75 HPNRPSTVFSGARDGQVKIWNL---ASRECQATLDAHRGLVNDISIDNNNGENFVTVGQD 131
Query: 183 AALNIW 200
L W
Sbjct: 132 NQLKYW 137
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRN 212
H++ V DL ++P LAS D ++ +WD R+
Sbjct: 274 HKKSVEDLAWSPTETGLLASCSADGSIKLWDTRS 307
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 42 DMHIKCFDTRTDCSKPS-WSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
D IK +DTR+ ++ AH V + +N + + S GDD L IW +
Sbjct: 297 DGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHENL-IVSGGDDGELKIWSLK 352
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 499 PRIVAERGEGPGLHGAPLTTVHGVF 425
PR + G G G GAPL+ VHG+F
Sbjct: 277 PRGLESIGMGLGAEGAPLSNVHGMF 301
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNG 215
H V FNP +ASAG D + +WD++ G
Sbjct: 296 HTNYVFCCSFNPQSSL-IASAGFDETVRVWDFKTG 329
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNG 215
+H+ + D ++ N QF +ASA DD + I+D +G
Sbjct: 253 SHQLGINDFSWSSNSQF-IASASDDTTVKIFDVISG 287
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
AH VR L F+P ++ L S DD L +W+
Sbjct: 330 AHENWVRGLAFHPKGKY-LISVADDKTLRVWE 360
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
HR + + F+P +AS +DA + +WDY G+
Sbjct: 105 HRLPITRVIFHPLWTI-MASCSEDATIKVWDYETGQ 139
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 108 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 203
AH VR L F+P ++ L S DD L +W+
Sbjct: 330 AHENWVRGLAFHPKGKY-LISVADDKTLRVWE 360
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
HR + + F+P +AS +DA + +WDY G+
Sbjct: 105 HRLPITRVIFHPLWTI-MASCSEDATIKVWDYETGQ 139
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 42 DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 221
DMHI+ F+ T + AH +R L +P + ++S+ DD + +WD+ N
Sbjct: 78 DMHIRVFNYNTLERVHQFE---AHSDYLRSLVVHPTLPYVISSS-DDMLVKMWDWDNKWA 133
Query: 222 PIFNRTDHSHW 254
+ H+H+
Sbjct: 134 MKQSFEGHTHY 144
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 NPHQGHTQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDF-NPNRQFHLASAGD 179
NP +T D +K + ++ P+++++ H + V +D+ + + ++ S D
Sbjct: 151 NPKDNNTFATASLDKTVKVWQFGSNV--PNFTLEG-HEKGVNCVDYYHGGEKPYIISGAD 207
Query: 180 DAALNIWDYRN 212
D + IWDY+N
Sbjct: 208 DHLVKIWDYQN 218
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 105 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
N H V L N QF + +GD + +WD NGK
Sbjct: 992 NDHTGSVVSLQLTSNNQFLITGSGD-FVVQMWDVTNGK 1028
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 129 DLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
++DF+P++ F L S D L IWD+R K
Sbjct: 501 NIDFSPDQSF-LISGDADGKLFIWDWRTHK 529
>Z73973-6|CAA98268.2| 189|Caenorhabditis elegans Hypothetical
protein F25D1.3 protein.
Length = 189
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 138 SLDPELIVYARCLCSKMVSSSQCACRSILCAYLAEQQTECDLDAG 4
S +P+LI + CLC K S+ C I+ ++ CD G
Sbjct: 107 SREPKLIAESVCLCRKSRGSTGAFCMPIVRKVPILRRVSCDRSTG 151
>Z71185-13|CAD54125.1| 189|Caenorhabditis elegans Hypothetical
protein F25D1.3 protein.
Length = 189
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 138 SLDPELIVYARCLCSKMVSSSQCACRSILCAYLAEQQTECDLDAG 4
S +P+LI + CLC K S+ C I+ ++ CD G
Sbjct: 107 SREPKLIAESVCLCRKSRGSTGAFCMPIVRKVPILRRVSCDRSTG 151
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 254
H V ++F+P+R+ ++SAG D + +W + + RT W
Sbjct: 393 HGGPVFSVNFSPDRRLLISSAG-DRTVRLWSMETQRNAVIYRTPAVVW 439
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 254
H V ++F+P+R+ ++SAG D + +W + + RT W
Sbjct: 393 HGGPVFSVNFSPDRRLLISSAG-DRTVRLWSMETQRNAVIYRTPAVVW 439
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 96 SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
+I NAH V + F + SAGDD + +WD R
Sbjct: 264 TIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKR 301
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 96 SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 209
+I NAH V + F + SAGDD + +WD R
Sbjct: 305 TIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKR 342
>AL117193-11|CAB55000.1| 174|Caenorhabditis elegans Hypothetical
protein Y105C5A.22 protein.
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 443 SEWSTVEPWTFASLSYDARLVIRESLDRSNTNFYCEL 553
S T E TF +S ARL+ R + + NTN+ ++
Sbjct: 35 SSIETTETSTFFEISSFARLLFRRRMPQGNTNYQMQI 71
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 111 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 218
H VR + P R LAS G+D + IW G+
Sbjct: 343 HTGQVRAITVEPERGELLASGGEDGTVRIWMIATGR 378
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 108 AHRQLVRDLDFNP-NRQFHLASAGDDAALNIWDY 206
AHR V L NP NR G D + IW++
Sbjct: 233 AHRSFVSTLSLNPHNRTLIATGGGRDKMVKIWEW 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,310,156
Number of Sequences: 27780
Number of extensions: 352359
Number of successful extensions: 1122
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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