BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0953 (844 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0561 - 4418452-4418658,4420168-4420509 31 1.1 04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 31 1.5 09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 30 2.7 05_07_0154 - 28059097-28060641 29 3.5 01_06_1655 + 38940790-38940864,38941245-38942057,38942149-389422... 29 3.5 04_03_0773 + 19451697-19451872,19452460-19452532,19452757-19452960 29 6.1 05_05_0045 + 21830291-21830343,21830446-21830541,21830620-218306... 28 8.1 >11_01_0561 - 4418452-4418658,4420168-4420509 Length = 182 Score = 31.1 bits (67), Expect = 1.1 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = +2 Query: 239 LASIEATVV-LNRLPRAHRPGVPVSPQNQTMTTTASTAAECGISGAIIAEDAESAGIGTT 415 L ++ +TVV ++RL RAH P VP T + ++G + + +AG+ T Sbjct: 34 LGNVSSTVVDVDRL-RAHAPPVPPPSAPPVPPETMNPPPRRQLTGEFVDVELGNAGLSTV 92 Query: 416 RRHR 427 RR R Sbjct: 93 RRRR 96 >04_04_0779 - 28023735-28024058,28024520-28024618,28024704-28024940, 28025227-28025334,28025427-28025486,28025813-28025888, 28025984-28026144,28026374-28026436,28026543-28026630, 28026872-28027612,28027695-28028239 Length = 833 Score = 30.7 bits (66), Expect = 1.5 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 238 VGVHRSHGRVESPPSRASAWRAG 306 + V RS GR E+PPS S W+ G Sbjct: 390 ISVPRSPGRTENPPSPGSRWKKG 412 >09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 Length = 574 Score = 29.9 bits (64), Expect = 2.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 488 GRFSQRPPPDHFTFGLLGVQTMP 556 G F QRPPPD + G L + + P Sbjct: 409 GEFDQRPPPDSYDHGSLNLSSPP 431 >05_07_0154 - 28059097-28060641 Length = 514 Score = 29.5 bits (63), Expect = 3.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +3 Query: 555 PDPKDNAQDCFDQYPLELENG 617 P P+ +DC D+YP+EL +G Sbjct: 485 PSPESPWEDCIDRYPVELVDG 505 >01_06_1655 + 38940790-38940864,38941245-38942057,38942149-38942268, 38942883-38943566 Length = 563 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/56 (28%), Positives = 23/56 (41%) Frame = +2 Query: 266 LNRLPRAHRPGVPVSPQNQTMTTTASTAAECGISGAIIAEDAESAGIGTTRRHRDP 433 + L +A G P N + S G GA A D + G G +R+H +P Sbjct: 8 ITALKKAFTSGPKDKPTNGQLVAQYSHQHRSGGGGAAAARDKKRWGFGRSRQHAEP 63 >04_03_0773 + 19451697-19451872,19452460-19452532,19452757-19452960 Length = 150 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 842 SXPSDFPYRYXQNKPPNCSWF 780 S PSD PY Y N+ P+C F Sbjct: 119 SAPSDGPYNYGYNEDPDCLTF 139 >05_05_0045 + 21830291-21830343,21830446-21830541,21830620-21830694, 21831329-21831403,21831497-21831719,21831813-21832056, 21832621-21832769,21832913-21832944,21832991-21833078, 21833157-21833438,21833542-21834243 Length = 672 Score = 28.3 bits (60), Expect = 8.1 Identities = 16/63 (25%), Positives = 31/63 (49%) Frame = -1 Query: 328 HSLVLWGNRHARPMRAREAIQHDRGFDGRQQRYHDEEWRPHLKI*PVEIKKKQTLEIHKT 149 H ++ W + + ++DR F+ + Q+ EE++ VEIK + +EIH + Sbjct: 304 HKVLCWDDYYTENSMNGFVKRYDRFFNEKLQKEDSEEFQTSND--KVEIKTRSPIEIHAS 361 Query: 148 KHY 140 + Y Sbjct: 362 QVY 364 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,964,214 Number of Sequences: 37544 Number of extensions: 590037 Number of successful extensions: 1615 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1615 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2338704516 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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