Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0952
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.8  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   6.8  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   8.9  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 139 HSAXTNLEVAYSGNPALINHGYGDAH 216
           H+A T+L + Y   P +  H Y   H
Sbjct: 152 HAAATSLPLHYPPPPPVYTHHYARYH 177


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 199 GYGDAH*P*YAEPH 240
           G+ D+H P Y  PH
Sbjct: 222 GFADSHSPLYKRPH 235


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 781 HKLRIARNKNLLHCSLIIKHLHKF 710
           HKL++  N +  H   I+  +HK+
Sbjct: 75  HKLKLTNNISDKHGFTILNSMHKY 98


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 232 EPHFRVDETTGGAQGVGEVPPGGINALLE 318
           +P   VD  TGG   +G+V    I+A+L+
Sbjct: 21  DPSASVDAATGGGSVLGDV---NISAILD 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,315
Number of Sequences: 336
Number of extensions: 4300
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)