Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0952
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0095 + 733307-734060,734779-734802,735029-736098                 31   1.1  
05_06_0171 - 26127547-26127592,26127955-26128079,26128187-261283...    30   1.9  
01_01_0108 + 793499-794413                                             29   3.4  
07_03_0960 - 22902279-22902530,22902604-22902726,22902855-229029...    28   7.8  
01_01_0098 + 744582-745380,746107-746130,746500-747569                 28   7.8  

>01_01_0095 + 733307-734060,734779-734802,735029-736098
          Length = 615

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = -3

Query: 298 LLGAPLLHPELPLSFHQP*NEVLHIRVSEHLRSHG*SKPGFRSKPPPDSLXRCAKGWVSE 119
           L+ A  ++  L LS+    NE +H++V   LR++G SKP   +      + RC K  V +
Sbjct: 272 LVVATAIYLSLKLSY----NEEVHLKVEMFLRTYGTSKPTRYTFSEVKKIARCFKEKVGQ 327

Query: 118 LGGF 107
            GGF
Sbjct: 328 -GGF 330


>05_06_0171 -
           26127547-26127592,26127955-26128079,26128187-26128336,
           26128738-26128827,26129012-26129251,26129735-26130394
          Length = 436

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 262 GGAQGVGEVPPGGINALLEVGQSLAQ---QMQAANPDLVEQLRRQLRPPGSGEN 414
           GG +G  ++P   + + +E+G  L Q   ++ A     V+QL RQ+  P   E+
Sbjct: 69  GGGRGAADLPAAAVASFVEIGGRLGQAGSELGACVGGAVQQLARQILVPFLAES 122


>01_01_0108 + 793499-794413
          Length = 304

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -3

Query: 268 LPLSFHQP*NEVLHIRVSEHLRSHG*SKPGFRSKPPPDSLXRCAKGWVSELGGF 107
           L LS     +E +H++V   LR++G SKP   S      + RC K  + + GGF
Sbjct: 5   LYLSLKSRYDEEVHLKVEMFLRTYGTSKPTRYSFSDVKKITRCFKEQLGQ-GGF 57


>07_03_0960 -
           22902279-22902530,22902604-22902726,22902855-22902941,
           22903017-22903068,22903197-22903321,22903476-22903684,
           22903990-22904191,22906205-22906309,22907264-22907325,
           22907625-22907814,22907887-22907982,22908069-22908171,
           22909117-22909220,22910239-22910325,22911238-22911323,
           22911410-22911502,22912586-22912673,22912786-22912898,
           22912989-22913111,22914473-22914524,22915185-22915286,
           22915539-22915582,22915667-22915740,22915825-22915916,
           22916566-22916633,22918572-22918647,22918767-22918952
          Length = 997

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 444 ISIEPVRGDWDPQFSYWSVLLSLS 515
           +S+E   GDW  +FS++SV++ L+
Sbjct: 343 MSLEAGEGDWSYEFSFFSVVIKLT 366


>01_01_0098 + 744582-745380,746107-746130,746500-747569
          Length = 630

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 268 LPLSFHQP*NEVLHIRVSEHLRSHG*SKP 182
           L LS  Q  NE +H++V   LR++G SKP
Sbjct: 292 LYLSLKQRYNEEVHLKVEMFLRTYGTSKP 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,174,447
Number of Sequences: 37544
Number of extensions: 461680
Number of successful extensions: 1024
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)