Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0952
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542282-1|CAG47077.1|  313|Homo sapiens alpha; complete cds, wi...    43   0.001
CR533517-1|CAG38548.1|  313|Homo sapiens alpha; complete cds, in...    43   0.001
BC008885-1|AAH08885.1|  313|Homo sapiens small glutamine-rich te...    43   0.001
BC005165-1|AAH05165.1|  313|Homo sapiens small glutamine-rich te...    43   0.001
BC002989-1|AAH02989.2|  313|Homo sapiens small glutamine-rich te...    43   0.001
BC000390-1|AAH00390.1|  313|Homo sapiens small glutamine-rich te...    43   0.001
AJ223828-1|CAA11565.1|  313|Homo sapiens small glutamine-rich te...    43   0.001
AJ133129-1|CAB39725.1|  313|Homo sapiens small glutamine-rich te...    43   0.001
AF408399-1|AAL01051.1|  313|Homo sapiens TPR-containing co-chape...    43   0.001
AF368279-1|AAP29457.1|  313|Homo sapiens small glutamine rich pr...    43   0.001
AC006538-2|AAD13117.1|  313|Homo sapiens small glutamine-rich te...    43   0.001
BC012044-1|AAH12044.1|  304|Homo sapiens small glutamine-rich te...    43   0.002
AK096321-1|BAC04761.1|  304|Homo sapiens protein ( Homo sapiens ...    43   0.002
AF368281-1|AAP29459.1|  304|Homo sapiens small glutamine rich pr...    43   0.002
AF075050-1|AAC28459.1|  120|Homo sapiens H_YN88E09.1 protein.          43   0.002

>CR542282-1|CAG47077.1|  313|Homo sapiens alpha; complete cds,
           without stopcodon.   protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>CR533517-1|CAG38548.1|  313|Homo sapiens alpha; complete cds, incl.
           stopcodon.   protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>BC008885-1|AAH08885.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>BC005165-1|AAH05165.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>BC002989-1|AAH02989.2|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>BC000390-1|AAH00390.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>AJ223828-1|CAA11565.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide (SGT) protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>AJ133129-1|CAB39725.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat containing protein protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>AF408399-1|AAL01051.1|  313|Homo sapiens TPR-containing
           co-chaperone protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>AF368279-1|AAP29457.1|  313|Homo sapiens small glutamine rich
           protein with tetratricopeptide repeats 1 protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>AC006538-2|AAD13117.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide (SGT) protein.
          Length = 313

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +1

Query: 307 ALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 417
           +L++ GQ  AQQMQ  NP+L+EQLR Q+R   P  S ++Q
Sbjct: 272 SLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311


>BC012044-1|AAH12044.1|  304|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, beta protein.
          Length = 304

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +1

Query: 262 GGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 393
           G A GVG +    +++L++ GQ  AQQ+Q  NP+L+EQLR  +R
Sbjct: 251 GPAAGVGGLTD--LSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 292


>AK096321-1|BAC04761.1|  304|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39002 fis, clone NT2RI2024008, moderately
           similar to SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE
           REPEAT-CONTAINING PROTEIN. ).
          Length = 304

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +1

Query: 262 GGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 393
           G A GVG +    +++L++ GQ  AQQ+Q  NP+L+EQLR  +R
Sbjct: 251 GPAAGVGGLTD--LSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 292


>AF368281-1|AAP29459.1|  304|Homo sapiens small glutamine rich
           protein with tetratricopeptide repeats 2 protein.
          Length = 304

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +1

Query: 262 GGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 393
           G A GVG +    +++L++ GQ  AQQ+Q  NP+L+EQLR  +R
Sbjct: 251 GPAAGVGGLTD--LSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 292


>AF075050-1|AAC28459.1|  120|Homo sapiens H_YN88E09.1 protein.
          Length = 120

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +1

Query: 262 GGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 393
           G A GVG +    +++L++ GQ  AQQ+Q  NP+L+EQLR  +R
Sbjct: 67  GPAAGVGGLTD--LSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,798,196
Number of Sequences: 237096
Number of extensions: 2691971
Number of successful extensions: 7039
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7039
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)