Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0951
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0903 - 6939672-6939782,6940051-6940110,6940221-6940322,694...    70   2e-12
07_03_1373 - 26110436-26110584,26110585-26110752,26110829-261108...    58   7e-09
08_02_0801 + 21349434-21349438,21349952-21349978,21351175-213512...    53   2e-07
04_03_0926 - 20861383-20862198,20862359-20862430,20862938-208631...    30   2.0  

>06_01_0903 -
           6939672-6939782,6940051-6940110,6940221-6940322,
           6940464-6940513,6940686-6940750,6940849-6940931,
           6941117-6941140,6941798-6941856,6942041-6942174,
           6942823-6942884,6942908-6942976
          Length = 272

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 26/71 (36%), Positives = 46/71 (64%)
 Frame = +2

Query: 20  DAILAEGIENLCNDLNLSPDDFKVLILAWKLNASQMCRFTKSEFVQGLKNMKTDSIKGIQ 199
           D I+ EG+   C DL + P D  +L+++W + A+ MC FT+ EF+ GL+++  DSI+ ++
Sbjct: 93  DMIMVEGVSQFCTDLQVDPQDIVMLVISWHMKAATMCEFTRQEFIGGLQSIGVDSIEKLR 152

Query: 200 HKLGDISVEMQ 232
            KL  +  E++
Sbjct: 153 EKLPSLRAEIK 163



 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 27/85 (31%), Positives = 46/85 (54%)
 Frame = +1

Query: 256 LYRFTFKFGLDVSSGQRILPSDIAIVLWRLVFTNNEPPILDRWLNYLEKNPQIRGIPKDT 435
           +Y F F +  +   GQ+ L  + A+ +W+L+F     P++D W  +L+     + I +DT
Sbjct: 171 IYNFAFAWARE--KGQKSLALETALGMWQLLFAERHWPLIDHWCQFLQVRHN-KAISRDT 227

Query: 436 WYMFLNFCEFVGNDLSSYDDTEAWP 510
           W   L F + +   LS+YD+  AWP
Sbjct: 228 WSQLLEFVKTIDPQLSNYDEEGAWP 252


>07_03_1373 -
           26110436-26110584,26110585-26110752,26110829-26110896,
           26111755-26111800,26111929-26112025,26112802-26112884,
           26112987-26113062,26113147-26113195,26113517-26113601,
           26114247-26114331
          Length = 301

 Score = 58.4 bits (135), Expect = 7e-09
 Identities = 31/83 (37%), Positives = 42/83 (50%)
 Frame = +1

Query: 265 FTFKFGLDVSSGQRILPSDIAIVLWRLVFTNNEPPILDRWLNYLEKNPQIRGIPKDTWYM 444
           + F F +   +GQ+ +    A+  WR+V  N    +LDRW N++EK  Q   I +D W  
Sbjct: 83  YDFVFFISRENGQKNISVQRAVGAWRMVL-NGRFWLLDRWCNFVEKY-QRYNITEDVWQQ 140

Query: 445 FLNFCEFVGNDLSSYDDTEAWPV 513
            L F   V  DL  YD   AWPV
Sbjct: 141 LLAFSRCVNEDLEGYDPKGAWPV 163


>08_02_0801 +
           21349434-21349438,21349952-21349978,21351175-21351249,
           21351333-21351369,21351469-21351552,21351821-21351881,
           21351961-21352067,21352162-21352227,21352366-21352461
          Length = 185

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/76 (34%), Positives = 43/76 (56%)
 Frame = +2

Query: 26  ILAEGIENLCNDLNLSPDDFKVLILAWKLNASQMCRFTKSEFVQGLKNMKTDSIKGIQHK 205
           I  EGIE LC+ L +   D ++L+LAWK+   +   FT  E+  GLK ++ D+I  ++  
Sbjct: 10  ISPEGIETLCSHLEVPHTDVRILMLAWKMGCEKQGYFTLDEWRSGLKALRADTINKLKKA 69

Query: 206 LGDISVEMQREPEQFK 253
             ++  E+ R P  F+
Sbjct: 70  FPELVQEVTR-PSNFQ 84



 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = +1

Query: 259 YRFTFKFGLDVSSGQRILPSDIAIVLWRLVFTNNEPPILDRWLNYLEKNPQIRGIPKDTW 438
           Y + F++ L     ++ +   +A  L  LV      P +D+ +NYL+   + + I  D W
Sbjct: 87  YPYAFRYCL-TEDKKKCIEIPVACELLNLVLGLQFRPQVDKLVNYLKHQSEYKVINMDQW 145

Query: 439 YMFLNFCEFVG-NDLSSYDDTEAWPV 513
             FL FC  +    L +YD   AWP+
Sbjct: 146 MGFLRFCNEINFPSLDNYDSDLAWPL 171


>04_03_0926 -
           20861383-20862198,20862359-20862430,20862938-20863123,
           20863214-20863304,20863698-20863852,20864501-20864579,
           20866797-20867263
          Length = 621

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 283 LDVSSGQRILPSDIAIVLWRLVFTNN-EPPILDRWLN 390
           ++   G+R LP+D+A  LW +VF N  E  +L +W N
Sbjct: 117 VEEEKGER-LPTDVAEKLWLMVFGNKLEKEVLAQWSN 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,329
Number of Sequences: 37544
Number of extensions: 350895
Number of successful extensions: 625
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)