Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0950
(852 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 27 0.25
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 27 0.25
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 25 0.57
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 25 0.76
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 25 0.76
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 23 4.1
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 23 4.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 4.1
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 22 5.4
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 22 5.4
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 22 5.4
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 22 5.4
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 22 5.4
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 22 5.4
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 22 5.4
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 9.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 26.6 bits (56), Expect = 0.25
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 331 SGTERATPAAGKASLAPALETDM 263
SG+E ++P AG +L+P ++T +
Sbjct: 92 SGSEMSSPGAGSGNLSPQIQTQV 114
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 26.6 bits (56), Expect = 0.25
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 331 SGTERATPAAGKASLAPALETDM 263
SG+E ++P AG +L+P ++T +
Sbjct: 92 SGSEMSSPGAGSGNLSPQIQTQV 114
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 307 RGWPFQFLKEPWPGVDESRSMWLSSRMT 390
R W FQ L P+P D+ + + + +T
Sbjct: 350 RAWLFQHLTHPYPSEDQKKQLAQDTGLT 377
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 25.0 bits (52), Expect = 0.76
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 226 LAEFVSNSPTHNPCRSPVPE 285
LAE VS SPT P SP PE
Sbjct: 87 LAEKVSVSPTTPPTPSPPPE 106
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 25.0 bits (52), Expect = 0.76
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSC 171
H Y V ++N Y+SP+ S G+ + P S + +SA SC
Sbjct: 126 HPYTV--ISNGYSSPMSSGSYDPYSPNGKIGREDLSPSSLNGYSADSC 171
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 307 RGWPFQFLKEPWPGVD 354
R W FQ L P+P D
Sbjct: 194 RAWLFQHLTHPYPSED 209
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 652 LSLSSCVKIGVLMXS*PRPTIFFH 581
LS KIG+L+ P FFH
Sbjct: 78 LSFYKAFKIGILLNQLITPLFFFH 101
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 468 LMSDAAGRI*PPDSAA*YLFRVAACICHP*RQPHRSALVYP 346
L + AA + PP +AA + AA + +Q HR + P
Sbjct: 129 LPAAAAAALLPPQTAAMAAYLNAAAVAAAAQQSHRLMMTSP 169
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 22.2 bits (45), Expect = 5.4
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +1
Query: 193 YDAANESVTLQLAEFVSNSPTH-----NPCRSPV--PEPDWPCPQRGWP 318
Y LQ F+ T+ N P+ P DW CPQ P
Sbjct: 12 YSQFENQAVLQSYNFLQEKTTYEYYENNQALPPITYPPSDWNCPQYNAP 60
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 297 RPVWLRHWRPTWIVSGRIGDE 235
RP W R+ ++I++ R GDE
Sbjct: 72 RPWWERYQPVSYILNTRSGDE 92
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 297 RPVWLRHWRPTWIVSGRIGDE 235
RP W R+ ++I++ R GDE
Sbjct: 73 RPWWERYQPVSYILNTRSGDE 93
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 297 RPVWLRHWRPTWIVSGRIGDE 235
RP W R+ ++I++ R GDE
Sbjct: 73 RPWWERYQPVSYILNTRSGDE 93
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 558 KPEGGQSQWKKIVGL 602
KP+ +S WKKI G+
Sbjct: 34 KPDSQKSLWKKIQGV 48
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 558 KPEGGQSQWKKIVGL 602
KP+ +S WKKI G+
Sbjct: 34 KPDSQKSLWKKIQGV 48
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 22.2 bits (45), Expect = 5.4
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +1
Query: 193 YDAANESVTLQLAEFVSNSPTH-----NPCRSPV--PEPDWPCPQRGWP 318
Y LQ F+ T+ N P+ P DW CPQ P
Sbjct: 3 YSQFENQAVLQSYNFLQEKTTYEYYENNQALPPITYPPSDWNCPQYNAP 51
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 316 PFQFLKEPWPGVDESRSM 369
PF + W G D+ RS+
Sbjct: 822 PFAYRGNQWVGFDDERSL 839
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 317 GHPRCGQGQSGSGTGDRHGL*VGELETNSASWSVTDSLAASYI 189
GH + S S GD H L E S + TDS S +
Sbjct: 1159 GHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV 1201
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 317 GHPRCGQGQSGSGTGDRHGL*VGELETNSASWSVTDSLAASYI 189
GH + S S GD H L E S + TDS S +
Sbjct: 1159 GHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV 1201
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 317 GHPRCGQGQSGSGTGDRHGL*VGELETNSASWSVTDSLAASYI 189
GH + S S GD H L E S + TDS S +
Sbjct: 1159 GHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV 1201
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 317 GHPRCGQGQSGSGTGDRHGL*VGELETNSASWSVTDSLAASYI 189
GH + S S GD H L E S + TDS S +
Sbjct: 1159 GHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV 1201
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,029
Number of Sequences: 336
Number of extensions: 4633
Number of successful extensions: 29
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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