Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0950
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 55 6e-08
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 55 7e-08
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 55 7e-08
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 54 1e-07
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 54 1e-07
Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 34 0.15
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 34 0.15
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 32 0.45
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 32 0.45
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 32 0.60
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 32 0.60
AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 31 1.0
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 30 2.4
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 29 3.2
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 29 4.2
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024859-19|AAK29975.1| 139|Caenorhabditis elegans Hypothetical... 29 5.5
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 28 9.7
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 55.2 bits (127), Expect = 6e-08
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449
+ S GARL+L +G L VPE LA + +Y+AV +P L + LSPV+ G
Sbjct: 508 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 565
Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605
L + VV+ HCAS W +LYA EG S W+K V +G
Sbjct: 566 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKAVTIG 617
Query: 606 QEXINTPIFTQLD 644
+E +NT +F Q +
Sbjct: 618 EENLNTNMFVQFE 630
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRP-RLGKGITQLSPVVKC 446
+ S G + + V L +P GA+ G+ +IYV V ++ P KG T LSP+V C
Sbjct: 1007 IGSLGGVIRCEKSNVELRIPAGAITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMC 1066
Query: 447 GPPRQTLNKSVVLQIPHCASL---KHGFWNLSL 536
GP K L++PH + G W+ SL
Sbjct: 1067 GPQGLKFEKQCELRMPHTGPVTADSDGQWSFSL 1099
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRP-RLGKGITQLSPVVKC 446
+ S G + + V L +P GA+ G+ +IYV V ++ P KG T LSP+V C
Sbjct: 1046 IGSLGGVIRCEKSNVELRIPAGAITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMC 1105
Query: 447 GPPRQTLNKSVVLQIPHCASL---KHGFWNLSL 536
GP K L++PH + G W+ SL
Sbjct: 1106 GPQGLKFEKQCELRMPHTGPVTADSDGQWSFSL 1138
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 54.0 bits (124), Expect = 1e-07
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449
+ S GARL+L +G L VPE LA + +Y+AV +P L + LSPV+ G
Sbjct: 508 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 565
Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605
L + VV+ HCAS W +LYA EG S W+K + +G
Sbjct: 566 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKALTIG 617
Query: 606 QEXINTPIFTQLD 644
+E +NT +F Q +
Sbjct: 618 EENLNTNMFVQFE 630
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 54.0 bits (124), Expect = 1e-07
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449
+ S GARL+L +G L VPE LA + +Y+AV +P L + LSPV+ G
Sbjct: 536 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 593
Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605
L + VV+ HCAS W +LYA EG S W+K + +G
Sbjct: 594 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKALTIG 645
Query: 606 QEXINTPIFTQLD 644
+E +NT +F Q +
Sbjct: 646 EENLNTNMFVQFE 658
>Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical
protein ZK617.4 protein.
Length = 178
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 76 DHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSG 186
DH +PS+ST S +P ES HSASS +S+G
Sbjct: 23 DHGASPSSSTSSSSRRLPPRPPLESSHSASSPSSSNG 59
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +1
Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPY--SESEHSASSCFTSSGSMYDA 201
+HY +NS+ S D Q + K Q + Y ++P S S S SS + S ++
Sbjct: 531 NHYQNGQSSNSWWSGNDGQ---TRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETP 587
Query: 202 ANESVTLQLAEFVSNSPTHNPCRSPVPEPD-WPCP 303
N + V N H P + +P P WP P
Sbjct: 588 TNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWPAP 622
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +1
Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPY--SESEHSASSCFTSSGSMYDA 201
+HY +NS+ S D Q + K Q + Y ++P S S S SS + S ++
Sbjct: 433 NHYQNGQSSNSWWSGNDGQ---TRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETP 489
Query: 202 ANESVTLQLAEFVSNSPTHNPCRSPVPEPD-WPCP 303
N + V N H P + +P P WP P
Sbjct: 490 TNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWPAP 524
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +1
Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAAN 207
H Y P+L + A H + S++ S S Y + H + F ++G Y
Sbjct: 44 HQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQ 103
Query: 208 ES 213
+S
Sbjct: 104 KS 105
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +1
Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAAN 207
H Y P+L + A H + S++ S S Y + H + F ++G Y
Sbjct: 44 HQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQ 103
Query: 208 ES 213
+S
Sbjct: 104 KS 105
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
+P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497
Query: 241 SNS 249
++S
Sbjct: 498 NSS 500
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
+P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497
Query: 241 SNS 249
++S
Sbjct: 498 NSS 500
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
+P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497
Query: 241 SNS 249
++S
Sbjct: 498 NSS 500
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
+P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497
Query: 241 SNS 249
++S
Sbjct: 498 NSS 500
>AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical
protein C17H12.9 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 112 QSDDYESKPYSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTHNPCRSPVPEP 288
+S++ +P EHSASS SS S S ++QL ++ + T N P PEP
Sbjct: 385 ESEERSEEPSIHFEHSASSSSASSSS-------SSSMQLDNYICDINTINILEEPSPEP 436
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +1
Query: 16 SDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESK-----PYSESEHSASSCF-T 177
+ TE ++V +S +PVD T A +G ++ S P S HS + F
Sbjct: 400 ASTEAPFEVAATEDSNQAPVDPIFT-EAPAEGSQEEQTSDGPVFIPEDGSVHSTEAPFEV 458
Query: 178 SSGSMYDAANESVTLQLAEFVSNSP-THNPCRSPVPEPDWPCPQ 306
++ + + + S + + E P P SPVPEP+ P P+
Sbjct: 459 AATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEPEDPVPR 502
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +1
Query: 16 SDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESK-----PYSESEHSASSCF-T 177
+ TE ++V +S +PVD T A +G ++ S P S HS + F
Sbjct: 400 ASTEAPFEVAATEDSNQAPVDPIFT-EAPAEGSQEEQTSDGPVFIPEDGSVHSTEAPFEV 458
Query: 178 SSGSMYDAANESVTLQLAEFVSNSP-THNPCRSPVPEPDWPCPQ 306
++ + + + S + + E P P SPVPEP+ P P+
Sbjct: 459 AATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEPEDPVPR 502
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/92 (21%), Positives = 34/92 (36%)
Frame = +1
Query: 13 NSDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSM 192
N T+ + +P + QV G + DYE+ + ++ A+ S SM
Sbjct: 14 NGSTDPYAVIPQQFGNGGQQPQQQVFTDYQQDGSATDYETYQQQQQQYRAAQASQQSSSM 73
Query: 193 YDAANESVTLQLAEFVSNSPTHNPCRSPVPEP 288
Y N+ Q F +S + + P P
Sbjct: 74 Y-YQNQMTAAQANYFPIHSASEHDFLGPQQPP 104
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +1
Query: 13 NSDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSG 186
N+ T H PH+ S A P ++ S + S E+ ++ S H F G
Sbjct: 263 NASTRHLSSAPHIATSVAMPSGLLLSSSNTKHVASSKSENPQFATSSHVVEESFLEDG 320
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 352 LPLARAPSGTERATPAAGKASLAPALETDMDCEWANW 242
+ LA +PSGT + A L A++ ++D WA W
Sbjct: 104 ITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGW 140
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 352 LPLARAPSGTERATPAAGKASLAPALETDMDCEWANW 242
+ LA +PSGT + A L A++ ++D WA W
Sbjct: 104 ITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGW 140
>AC024859-19|AAK29975.1| 139|Caenorhabditis elegans Hypothetical
protein Y71H2AM.4 protein.
Length = 139
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 385 MTDTGRDSEKVSRS*VRWLNAARRVRH*TSPSSYKYHIAPASSM 516
M D+ R SEK ++ A R RH P ++ Y + AS+M
Sbjct: 1 MADSTRVSEKEIERRETFIRAGHRARHLADPFTWSYPLKGASAM 44
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 79 HQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTH 258
H + S S+ ++Y+S S+ E A+ +S + + N SVT+++ + ++++
Sbjct: 10 HSICNSVSS---GENYKSPESSDCEGYATPLASSLTDISNVINHSVTIKVPDTIADANDL 66
Query: 259 NPC-RSPVPEPDWPCPQRGWPFQFLKEP 339
P R+PV P P +L++P
Sbjct: 67 EPGERTPVSTPRAISPPIVKQVMYLQKP 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,580,528
Number of Sequences: 27780
Number of extensions: 460101
Number of successful extensions: 1387
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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