BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0950 (852 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 55 6e-08 AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 55 7e-08 AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 55 7e-08 S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 54 1e-07 S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 54 1e-07 Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical pr... 34 0.11 AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 34 0.15 AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 34 0.15 AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 32 0.45 AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 32 0.45 Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 32 0.60 Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 32 0.60 Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 32 0.60 Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 32 0.60 AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 31 1.0 Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 31 1.4 Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 31 1.4 Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 30 2.4 AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 29 3.2 AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 29 4.2 AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 29 4.2 AC024859-19|AAK29975.1| 139|Caenorhabditis elegans Hypothetical... 29 5.5 Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 28 9.7 >AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated protein 5, isoform a protein. Length = 919 Score = 55.2 bits (127), Expect = 6e-08 Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Frame = +3 Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449 + S GARL+L +G L VPE LA + +Y+AV +P L + LSPV+ G Sbjct: 508 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 565 Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605 L + VV+ HCAS W +LYA EG S W+K V +G Sbjct: 566 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKAVTIG 617 Query: 606 QEXINTPIFTQLD 644 +E +NT +F Q + Sbjct: 618 EENLNTNMFVQFE 630 >AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical protein Y105E8A.26b protein. Length = 1133 Score = 54.8 bits (126), Expect = 7e-08 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = +3 Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRP-RLGKGITQLSPVVKC 446 + S G + + V L +P GA+ G+ +IYV V ++ P KG T LSP+V C Sbjct: 1007 IGSLGGVIRCEKSNVELRIPAGAITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMC 1066 Query: 447 GPPRQTLNKSVVLQIPHCASL---KHGFWNLSL 536 GP K L++PH + G W+ SL Sbjct: 1067 GPQGLKFEKQCELRMPHTGPVTADSDGQWSFSL 1099 >AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical protein Y105E8A.26a protein. Length = 1172 Score = 54.8 bits (126), Expect = 7e-08 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = +3 Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRP-RLGKGITQLSPVVKC 446 + S G + + V L +P GA+ G+ +IYV V ++ P KG T LSP+V C Sbjct: 1046 IGSLGGVIRCEKSNVELRIPAGAITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMC 1105 Query: 447 GPPRQTLNKSVVLQIPHCASL---KHGFWNLSL 536 GP K L++PH + G W+ SL Sbjct: 1106 GPQGLKFEKQCELRMPHTGPVTADSDGQWSFSL 1138 >S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. Length = 919 Score = 54.0 bits (124), Expect = 1e-07 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Frame = +3 Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449 + S GARL+L +G L VPE LA + +Y+AV +P L + LSPV+ G Sbjct: 508 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 565 Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605 L + VV+ HCAS W +LYA EG S W+K + +G Sbjct: 566 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKALTIG 617 Query: 606 QEXINTPIFTQLD 644 +E +NT +F Q + Sbjct: 618 EENLNTNMFVQFE 630 >S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. Length = 947 Score = 54.0 bits (124), Expect = 1e-07 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Frame = +3 Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449 + S GARL+L +G L VPE LA + +Y+AV +P L + LSPV+ G Sbjct: 536 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 593 Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605 L + VV+ HCAS W +LYA EG S W+K + +G Sbjct: 594 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKALTIG 645 Query: 606 QEXINTPIFTQLD 644 +E +NT +F Q + Sbjct: 646 EENLNTNMFVQFE 658 >Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical protein ZK617.4 protein. Length = 178 Score = 34.3 bits (75), Expect = 0.11 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +1 Query: 76 DHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSG 186 DH +PS+ST S +P ES HSASS +S+G Sbjct: 23 DHGASPSSSTSSSSRRLPPRPPLESSHSASSPSSSNG 59 >AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 64, isoform a protein. Length = 760 Score = 33.9 bits (74), Expect = 0.15 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%) Frame = +1 Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPY--SESEHSASSCFTSSGSMYDA 201 +HY +NS+ S D Q + K Q + Y ++P S S S SS + S ++ Sbjct: 531 NHYQNGQSSNSWWSGNDGQ---TRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETP 587 Query: 202 ANESVTLQLAEFVSNSPTHNPCRSPVPEPD-WPCP 303 N + V N H P + +P P WP P Sbjct: 588 TNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWPAP 622 >AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 64, isoform b protein. Length = 696 Score = 33.9 bits (74), Expect = 0.15 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%) Frame = +1 Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPY--SESEHSASSCFTSSGSMYDA 201 +HY +NS+ S D Q + K Q + Y ++P S S S SS + S ++ Sbjct: 433 NHYQNGQSSNSWWSGNDGQ---TRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETP 489 Query: 202 ANESVTLQLAEFVSNSPTHNPCRSPVPEPD-WPCP 303 N + V N H P + +P P WP P Sbjct: 490 TNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWPAP 524 >AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. Length = 237 Score = 32.3 bits (70), Expect = 0.45 Identities = 15/62 (24%), Positives = 25/62 (40%) Frame = +1 Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAAN 207 H Y P+L + A H + S++ S S Y + H + F ++G Y Sbjct: 44 HQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQ 103 Query: 208 ES 213 +S Sbjct: 104 KS 105 >AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans homeobox protein 17 protein. Length = 237 Score = 32.3 bits (70), Expect = 0.45 Identities = 15/62 (24%), Positives = 25/62 (40%) Frame = +1 Query: 28 HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAAN 207 H Y P+L + A H + S++ S S Y + H + F ++G Y Sbjct: 44 HQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQ 103 Query: 208 ES 213 +S Sbjct: 104 KS 105 >Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein F53B7.5b protein. Length = 2892 Score = 31.9 bits (69), Expect = 0.60 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = +1 Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240 +P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497 Query: 241 SNS 249 ++S Sbjct: 498 NSS 500 >Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein F53B7.5a protein. Length = 3095 Score = 31.9 bits (69), Expect = 0.60 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = +1 Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240 +P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497 Query: 241 SNS 249 ++S Sbjct: 498 NSS 500 >Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical protein F53B7.5b protein. Length = 2892 Score = 31.9 bits (69), Expect = 0.60 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = +1 Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240 +P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497 Query: 241 SNS 249 ++S Sbjct: 498 NSS 500 >Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical protein F53B7.5a protein. Length = 3095 Score = 31.9 bits (69), Expect = 0.60 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = +1 Query: 67 SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240 +P+D +PS ST+ QS SES S+S T+ SGS DA + S + +E Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497 Query: 241 SNS 249 ++S Sbjct: 498 NSS 500 >AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical protein C17H12.9 protein. Length = 459 Score = 31.1 bits (67), Expect = 1.0 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +1 Query: 112 QSDDYESKPYSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTHNPCRSPVPEP 288 +S++ +P EHSASS SS S S ++QL ++ + T N P PEP Sbjct: 385 ESEERSEEPSIHFEHSASSSSASSSS-------SSSMQLDNYICDINTINILEEPSPEP 436 >Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical protein Y57G11A.2 protein. Length = 640 Score = 30.7 bits (66), Expect = 1.4 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Frame = +1 Query: 16 SDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESK-----PYSESEHSASSCF-T 177 + TE ++V +S +PVD T A +G ++ S P S HS + F Sbjct: 400 ASTEAPFEVAATEDSNQAPVDPIFT-EAPAEGSQEEQTSDGPVFIPEDGSVHSTEAPFEV 458 Query: 178 SSGSMYDAANESVTLQLAEFVSNSP-THNPCRSPVPEPDWPCPQ 306 ++ + + + S + + E P P SPVPEP+ P P+ Sbjct: 459 AATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEPEDPVPR 502 >Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical protein Y57G11A.2 protein. Length = 640 Score = 30.7 bits (66), Expect = 1.4 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Frame = +1 Query: 16 SDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESK-----PYSESEHSASSCF-T 177 + TE ++V +S +PVD T A +G ++ S P S HS + F Sbjct: 400 ASTEAPFEVAATEDSNQAPVDPIFT-EAPAEGSQEEQTSDGPVFIPEDGSVHSTEAPFEV 458 Query: 178 SSGSMYDAANESVTLQLAEFVSNSP-THNPCRSPVPEPDWPCPQ 306 ++ + + + S + + E P P SPVPEP+ P P+ Sbjct: 459 AATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEPEDPVPR 502 >Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical protein M88.5a protein. Length = 828 Score = 29.9 bits (64), Expect = 2.4 Identities = 20/92 (21%), Positives = 34/92 (36%) Frame = +1 Query: 13 NSDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSM 192 N T+ + +P + QV G + DYE+ + ++ A+ S SM Sbjct: 14 NGSTDPYAVIPQQFGNGGQQPQQQVFTDYQQDGSATDYETYQQQQQQYRAAQASQQSSSM 73 Query: 193 YDAANESVTLQLAEFVSNSPTHNPCRSPVPEP 288 Y N+ Q F +S + + P P Sbjct: 74 Y-YQNQMTAAQANYFPIHSASEHDFLGPQQPP 104 >AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical protein Y38H6C.14 protein. Length = 814 Score = 29.5 bits (63), Expect = 3.2 Identities = 15/58 (25%), Positives = 23/58 (39%) Frame = +1 Query: 13 NSDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSG 186 N+ T H PH+ S A P ++ S + S E+ ++ S H F G Sbjct: 263 NASTRHLSSAPHIATSVAMPSGLLLSSSNTKHVASSKSENPQFATSSHVVEESFLEDG 320 >AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical protein W09B6.1b protein. Length = 813 Score = 29.1 bits (62), Expect = 4.2 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 352 LPLARAPSGTERATPAAGKASLAPALETDMDCEWANW 242 + LA +PSGT + A L A++ ++D WA W Sbjct: 104 ITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGW 140 >AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical protein W09B6.1a protein. Length = 2054 Score = 29.1 bits (62), Expect = 4.2 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 352 LPLARAPSGTERATPAAGKASLAPALETDMDCEWANW 242 + LA +PSGT + A L A++ ++D WA W Sbjct: 104 ITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGW 140 >AC024859-19|AAK29975.1| 139|Caenorhabditis elegans Hypothetical protein Y71H2AM.4 protein. Length = 139 Score = 28.7 bits (61), Expect = 5.5 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 385 MTDTGRDSEKVSRS*VRWLNAARRVRH*TSPSSYKYHIAPASSM 516 M D+ R SEK ++ A R RH P ++ Y + AS+M Sbjct: 1 MADSTRVSEKEIERRETFIRAGHRARHLADPFTWSYPLKGASAM 44 >Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical protein F36G3.1 protein. Length = 964 Score = 27.9 bits (59), Expect = 9.7 Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 79 HQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTH 258 H + S S+ ++Y+S S+ E A+ +S + + N SVT+++ + ++++ Sbjct: 10 HSICNSVSS---GENYKSPESSDCEGYATPLASSLTDISNVINHSVTIKVPDTIADANDL 66 Query: 259 NPC-RSPVPEPDWPCPQRGWPFQFLKEP 339 P R+PV P P +L++P Sbjct: 67 EPGERTPVSTPRAISPPIVKQVMYLQKP 94 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,580,528 Number of Sequences: 27780 Number of extensions: 460101 Number of successful extensions: 1387 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1263 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1381 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2118983636 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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