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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0950
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036698-4|AAB88355.1|  919|Caenorhabditis elegans Uncoordinated...    55   6e-08
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    55   7e-08
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    55   7e-08
S47168-2|AAB23866.2|  919|Caenorhabditis elegans UNC-5 protein.        54   1e-07
S47168-1|AAB23867.2|  947|Caenorhabditis elegans UNC-5 protein.        54   1e-07
Z73897-3|CAE18053.1|  178|Caenorhabditis elegans Hypothetical pr...    34   0.11 
AF039718-5|AAP68905.1|  760|Caenorhabditis elegans Prion-like-(q...    34   0.15 
AF039718-4|AAP68906.2|  696|Caenorhabditis elegans Prion-like-(q...    34   0.15 
AF272397-1|AAF76229.1|  237|Caenorhabditis elegans CEH-17 protein.     32   0.45 
AF003151-5|AAK18908.1|  237|Caenorhabditis elegans C.elegans hom...    32   0.45 
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    32   0.60 
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    32   0.60 
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    32   0.60 
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    32   0.60 
AF045642-10|AAC02587.1|  459|Caenorhabditis elegans Hypothetical...    31   1.0  
Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL031630-13|CAA20992.1|  814|Caenorhabditis elegans Hypothetical...    29   3.2  
AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical ...    29   4.2  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    29   4.2  
AC024859-19|AAK29975.1|  139|Caenorhabditis elegans Hypothetical...    29   5.5  
Z47069-1|CAA87338.1|  964|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>AF036698-4|AAB88355.1|  919|Caenorhabditis elegans Uncoordinated
           protein 5, isoform a protein.
          Length = 919

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
 Frame = +3

Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449
           + S GARL+L  +G  L VPE  LA    + +Y+AV      +P L    + LSPV+  G
Sbjct: 508 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 565

Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605
                       L + VV+   HCAS      W  +LYA       EG  S W+K V +G
Sbjct: 566 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKAVTIG 617

Query: 606 QEXINTPIFTQLD 644
           +E +NT +F Q +
Sbjct: 618 EENLNTNMFVQFE 630


>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
            protein Y105E8A.26b protein.
          Length = 1133

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = +3

Query: 270  VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRP-RLGKGITQLSPVVKC 446
            + S G  +    + V L +P GA+  G+  +IYV V ++    P    KG T LSP+V C
Sbjct: 1007 IGSLGGVIRCEKSNVELRIPAGAITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMC 1066

Query: 447  GPPRQTLNKSVVLQIPHCASL---KHGFWNLSL 536
            GP      K   L++PH   +     G W+ SL
Sbjct: 1067 GPQGLKFEKQCELRMPHTGPVTADSDGQWSFSL 1099


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
            protein Y105E8A.26a protein.
          Length = 1172

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = +3

Query: 270  VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRP-RLGKGITQLSPVVKC 446
            + S G  +    + V L +P GA+  G+  +IYV V ++    P    KG T LSP+V C
Sbjct: 1046 IGSLGGVIRCEKSNVELRIPAGAITEGQEHEIYVKVCREGDSSPIDRSKGETLLSPLVMC 1105

Query: 447  GPPRQTLNKSVVLQIPHCASL---KHGFWNLSL 536
            GP      K   L++PH   +     G W+ SL
Sbjct: 1106 GPQGLKFEKQCELRMPHTGPVTADSDGQWSFSL 1138


>S47168-2|AAB23866.2|  919|Caenorhabditis elegans UNC-5 protein.
          Length = 919

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
 Frame = +3

Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449
           + S GARL+L  +G  L VPE  LA    + +Y+AV      +P L    + LSPV+  G
Sbjct: 508 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 565

Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605
                       L + VV+   HCAS      W  +LYA       EG  S W+K + +G
Sbjct: 566 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKALTIG 617

Query: 606 QEXINTPIFTQLD 644
           +E +NT +F Q +
Sbjct: 618 EENLNTNMFVQFE 630


>S47168-1|AAB23867.2|  947|Caenorhabditis elegans UNC-5 protein.
          Length = 947

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
 Frame = +3

Query: 270 VSSAGARLALPAAGVALSVPEGALARGRREQIYVAVVKDDRYRPRLGKGITQLSPVVKCG 449
           + S GARL+L  +G  L VPE  LA    + +Y+AV      +P L    + LSPV+  G
Sbjct: 536 IDSNGARLSLSKSGARLIVPE--LAVEGEKMLYLAVSDTLTDQPHLKPIESALSPVIVIG 593

Query: 450 P-------PRQTLNKSVVLQIPHCAS-LKHGFWNLSLYAIDHNSKPEGGQSQWKKIVGLG 605
                       L + VV+   HCAS      W  +LYA       EG  S W+K + +G
Sbjct: 594 QCDVSMSAHDNILRRPVVVSFRHCASTFPRDNWQFTLYA------DEG--SGWQKALTIG 645

Query: 606 QEXINTPIFTQLD 644
           +E +NT +F Q +
Sbjct: 646 EENLNTNMFVQFE 658


>Z73897-3|CAE18053.1|  178|Caenorhabditis elegans Hypothetical
           protein ZK617.4 protein.
          Length = 178

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +1

Query: 76  DHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSG 186
           DH  +PS+ST   S     +P  ES HSASS  +S+G
Sbjct: 23  DHGASPSSSTSSSSRRLPPRPPLESSHSASSPSSSNG 59


>AF039718-5|AAP68905.1|  760|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
           isoform a protein.
          Length = 760

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
 Frame = +1

Query: 28  HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPY--SESEHSASSCFTSSGSMYDA 201
           +HY     +NS+ S  D Q   +   K Q + Y ++P   S S  S SS + S  ++   
Sbjct: 531 NHYQNGQSSNSWWSGNDGQ---TRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETP 587

Query: 202 ANESVTLQLAEFVSNSPTHNPCRSPVPEPD-WPCP 303
            N   +      V N   H P  + +P P  WP P
Sbjct: 588 TNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWPAP 622


>AF039718-4|AAP68906.2|  696|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
           isoform b protein.
          Length = 696

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
 Frame = +1

Query: 28  HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPY--SESEHSASSCFTSSGSMYDA 201
           +HY     +NS+ S  D Q   +   K Q + Y ++P   S S  S SS + S  ++   
Sbjct: 433 NHYQNGQSSNSWWSGNDGQ---TRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETP 489

Query: 202 ANESVTLQLAEFVSNSPTHNPCRSPVPEPD-WPCP 303
            N   +      V N   H P  + +P P  WP P
Sbjct: 490 TNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWPAP 524


>AF272397-1|AAF76229.1|  237|Caenorhabditis elegans CEH-17 protein.
          Length = 237

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = +1

Query: 28  HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAAN 207
           H Y  P+L +  A    H  + S++    S    S  Y  + H +   F ++G  Y    
Sbjct: 44  HQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQ 103

Query: 208 ES 213
           +S
Sbjct: 104 KS 105


>AF003151-5|AAK18908.1|  237|Caenorhabditis elegans C.elegans
           homeobox protein 17 protein.
          Length = 237

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = +1

Query: 28  HHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAAN 207
           H Y  P+L +  A    H  + S++    S    S  Y  + H +   F ++G  Y    
Sbjct: 44  HQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQ 103

Query: 208 ES 213
           +S
Sbjct: 104 KS 105


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +1

Query: 67  SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
           +P+D   +PS ST+ QS        SES  S+S   T+  SGS  DA + S +   +E  
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497

Query: 241 SNS 249
           ++S
Sbjct: 498 NSS 500


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +1

Query: 67  SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
           +P+D   +PS ST+ QS        SES  S+S   T+  SGS  DA + S +   +E  
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497

Query: 241 SNS 249
           ++S
Sbjct: 498 NSS 500


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +1

Query: 67  SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
           +P+D   +PS ST+ QS        SES  S+S   T+  SGS  DA + S +   +E  
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497

Query: 241 SNS 249
           ++S
Sbjct: 498 NSS 500


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +1

Query: 67  SPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTS--SGSMYDAANESVTLQLAEFV 240
           +P+D   +PS ST+ QS        SES  S+S   T+  SGS  DA + S +   +E  
Sbjct: 438 TPLDVSSSPSESTESQSSTPSDASSSESASSSSPAATTEESGSSTDAVSSSPSGSSSESP 497

Query: 241 SNS 249
           ++S
Sbjct: 498 NSS 500


>AF045642-10|AAC02587.1|  459|Caenorhabditis elegans Hypothetical
           protein C17H12.9 protein.
          Length = 459

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +1

Query: 112 QSDDYESKPYSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTHNPCRSPVPEP 288
           +S++   +P    EHSASS   SS S       S ++QL  ++ +  T N    P PEP
Sbjct: 385 ESEERSEEPSIHFEHSASSSSASSSS-------SSSMQLDNYICDINTINILEEPSPEP 436


>Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
 Frame = +1

Query: 16  SDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESK-----PYSESEHSASSCF-T 177
           + TE  ++V    +S  +PVD   T  A  +G  ++  S      P   S HS  + F  
Sbjct: 400 ASTEAPFEVAATEDSNQAPVDPIFT-EAPAEGSQEEQTSDGPVFIPEDGSVHSTEAPFEV 458

Query: 178 SSGSMYDAANESVTLQLAEFVSNSP-THNPCRSPVPEPDWPCPQ 306
           ++  + +  + S +  + E     P    P  SPVPEP+ P P+
Sbjct: 459 AATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEPEDPVPR 502


>Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
 Frame = +1

Query: 16  SDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESK-----PYSESEHSASSCF-T 177
           + TE  ++V    +S  +PVD   T  A  +G  ++  S      P   S HS  + F  
Sbjct: 400 ASTEAPFEVAATEDSNQAPVDPIFT-EAPAEGSQEEQTSDGPVFIPEDGSVHSTEAPFEV 458

Query: 178 SSGSMYDAANESVTLQLAEFVSNSP-THNPCRSPVPEPDWPCPQ 306
           ++  + +  + S +  + E     P    P  SPVPEP+ P P+
Sbjct: 459 AATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEPEDPVPR 502


>Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical
           protein M88.5a protein.
          Length = 828

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/92 (21%), Positives = 34/92 (36%)
 Frame = +1

Query: 13  NSDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSM 192
           N  T+ +  +P    +       QV       G + DYE+    + ++ A+     S SM
Sbjct: 14  NGSTDPYAVIPQQFGNGGQQPQQQVFTDYQQDGSATDYETYQQQQQQYRAAQASQQSSSM 73

Query: 193 YDAANESVTLQLAEFVSNSPTHNPCRSPVPEP 288
           Y   N+    Q   F  +S + +    P   P
Sbjct: 74  Y-YQNQMTAAQANYFPIHSASEHDFLGPQQPP 104


>AL031630-13|CAA20992.1|  814|Caenorhabditis elegans Hypothetical
           protein Y38H6C.14 protein.
          Length = 814

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = +1

Query: 13  NSDTEHHYDVPHLTNSYASPVDHQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSG 186
           N+ T H    PH+  S A P    ++ S +    S   E+  ++ S H     F   G
Sbjct: 263 NASTRHLSSAPHIATSVAMPSGLLLSSSNTKHVASSKSENPQFATSSHVVEESFLEDG 320


>AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical
           protein W09B6.1b protein.
          Length = 813

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 352 LPLARAPSGTERATPAAGKASLAPALETDMDCEWANW 242
           + LA +PSGT +   A     L  A++ ++D  WA W
Sbjct: 104 ITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGW 140


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 352 LPLARAPSGTERATPAAGKASLAPALETDMDCEWANW 242
           + LA +PSGT +   A     L  A++ ++D  WA W
Sbjct: 104 ITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGW 140


>AC024859-19|AAK29975.1|  139|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.4 protein.
          Length = 139

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 385 MTDTGRDSEKVSRS*VRWLNAARRVRH*TSPSSYKYHIAPASSM 516
           M D+ R SEK       ++ A  R RH   P ++ Y +  AS+M
Sbjct: 1   MADSTRVSEKEIERRETFIRAGHRARHLADPFTWSYPLKGASAM 44


>Z47069-1|CAA87338.1|  964|Caenorhabditis elegans Hypothetical
           protein F36G3.1 protein.
          Length = 964

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +1

Query: 79  HQVTPSASTKGQSDDYESKPYSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTH 258
           H +  S S+    ++Y+S   S+ E  A+   +S   + +  N SVT+++ + ++++   
Sbjct: 10  HSICNSVSS---GENYKSPESSDCEGYATPLASSLTDISNVINHSVTIKVPDTIADANDL 66

Query: 259 NPC-RSPVPEPDWPCPQRGWPFQFLKEP 339
            P  R+PV  P    P       +L++P
Sbjct: 67  EPGERTPVSTPRAISPPIVKQVMYLQKP 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,580,528
Number of Sequences: 27780
Number of extensions: 460101
Number of successful extensions: 1387
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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