Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0950
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.38 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   2.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 31   HYDVPHLTNSYASPVDHQVTPSASTKGQSDD 123
            +Y VPH T  Y     H + P    + QSDD
Sbjct: 1068 YYGVPHSTLEYKVKERHLMRPRKRDQKQSDD 1098


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 422 AAESGG*MRPAASDIKQVRRLTNTTLRQPQAWLLEPVSV 538
           A  SG     AA+   +VR      ++ P  W++EP  V
Sbjct: 681 AEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDV 719


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -3

Query: 346 LARAPSGTERATPAAGKASLAPALETDMDCEWA 248
           LAR+P+G+  +     +A +A   +TD++ E+A
Sbjct: 82  LARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYA 114


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 139 YSESEHSASSCFTSSGSMYDAANESVTLQLAEFVSNSPTH 258
           ++ESE+  +SC  S+ + Y   N   T Q  +++  S ++
Sbjct: 369 FNESENRRNSCLGSTETYYSKHN---TQQFTQYIPESSSN 405


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 536 VRHRPQQ*ARGRPVSVEEDRGPRSRXHQHPNLHTARQRQD 655
           +R R ++ ++    S+ + R P S     P+L T++  QD
Sbjct: 17  IRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQD 56


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 408 GKGITQLSPVVKCGPPRQTLNKSVVLQIPHCASLKHGF 521
           G  +T+   +  CGPP +    ++ +     ASL  GF
Sbjct: 8   GGTMTEDYDMTGCGPPEEETGSNLPVWEAAAASLTLGF 45


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 408 GKGITQLSPVVKCGPPRQTLNKSVVLQIPHCASLKHGF 521
           G  +T+   +  CGPP +    ++ +     ASL  GF
Sbjct: 8   GGTMTEDYDMTGCGPPEEETGSNLPVWEAAAASLTLGF 45


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 408 GKGITQLSPVVKCGPPRQTLNKSVVLQIPHCASLKHGF 521
           G  +T+   +  CGPP +    ++ +     ASL  GF
Sbjct: 8   GGTMTEDYDMTGCGPPEEETGSNLPVWEAAAASLTLGF 45


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 314 HPRCGQGQSGSGTGDRHGL 258
           +PR  Q   G G GD +G+
Sbjct: 36  YPRSFQDSDGDGIGDLNGI 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,735
Number of Sequences: 438
Number of extensions: 5680
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)