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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0949
         (837 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar...    83   6e-17
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy...    35   0.012
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha...    32   0.12 
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ...    30   0.47 
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch...    29   0.62 
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz...    29   0.82 
SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces ...    29   1.1  
SPAC1002.16c |||nicotinic acid plasma membrane transporter |Schi...    28   1.4  
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G...    27   4.4  
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c...    27   4.4  
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|...    26   7.6  
SPCC613.09 |sen54||tRNA-splicing endonuclease subunit Sen54 |Sch...    26   7.6  
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ...    26   7.6  

>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 404

 Score = 82.6 bits (195), Expect = 6e-17
 Identities = 34/63 (53%), Positives = 43/63 (68%)
 Frame = +2

Query: 506 SGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVA*RRGSKTQ 685
           SG C+YG KCQFAHG +EL+   RHPKYK+E CR+F   G+CPYG RC F+     ++  
Sbjct: 338 SGTCRYGSKCQFAHGNQELKEPPRHPKYKSERCRSFMMYGYCPYGLRCCFLHDESNAQKS 397

Query: 686 RTI 694
            TI
Sbjct: 398 ATI 400



 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 587 YKTELCRTFHSVGFCPYGPRCHF 655
           YKTE C+ +   G C YG +C F
Sbjct: 327 YKTEPCKNWQISGTCRYGSKCQF 349


>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 516

 Score = 35.1 bits (77), Expect = 0.012
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 340 CSQLRPLETELAPIGPIAPPMFPFIVCTGEFDSSRTDH 227
           C +LRP    + P+ P+  P+   IVC G  D++R  H
Sbjct: 138 CRELRPETRPVDPVSPVVSPVDGRIVCQGVVDNNRIQH 175


>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 617

 Score = 31.9 bits (69), Expect = 0.12
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +2

Query: 464 HKSLQDRALPTV*RSGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGP 643
           H    +   P +     C Y + C+F H V E     + P    + C  F   G CP G 
Sbjct: 40  HVKENNALCPAISIGNECPYKENCKFPHDV-EAYLATKAPDI-GDKCPIFERYGVCPAGF 97

Query: 644 RCHFVA 661
           +C ++A
Sbjct: 98  KCRWLA 103


>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 377

 Score = 29.9 bits (64), Expect = 0.47
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +2

Query: 602 CRTFHSVGFCPYGPRCHFVA*RRGSKTQRTIVARRFIGHRSHRGGSMGVVYERRSRS-PT 778
           CR +++ G C  G  C FV       T++TI   +F+  R ++     + +E   R  P 
Sbjct: 209 CRYYNANGICGKGAACRFV----HEPTRKTI-CPKFLNGRCNKAEDCNLSHELDPRRIPA 263

Query: 779 FAXFSIEXLNFPTCDVGH 832
              F +   N P C   H
Sbjct: 264 CRYFLLGKCNNPNCRYVH 281


>SPBC13E7.02 |cwf24||GCN5-related N
           acetyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 533

 Score = 29.5 bits (63), Expect = 0.62
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 587 YKTELCRTFHSVGFCPYGPRCHFVA*RRGSK 679
           Y+ ++C+ +   G+C YG  C F+  R   K
Sbjct: 185 YQPDVCKDYKLTGYCGYGDTCKFLHMREDYK 215



 Score = 25.8 bits (54), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 506 SGVCKYGDKCQFAH 547
           +G C YGD C+F H
Sbjct: 196 TGYCGYGDTCKFLH 209


>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 547

 Score = 29.1 bits (62), Expect = 0.82
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 503 RSGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRC 649
           R+G C  G+ C F+H +   R           +C+ F   G C +GP+C
Sbjct: 51  RNGTCTAGENCPFSHSLETER----------PICKYFLK-GNCKFGPKC 88


>SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 170

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 509 GVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFV 658
           G+CK G++C F H      NL++ P      C  +   G+C  G  C ++
Sbjct: 60  GLCKKGEQCDFLHEY----NLKKMPP-----CHFYAERGWCSNGEECLYL 100



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 509 GVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRC 649
           G C  G++C + H           P  +  +C  ++++GFCP GP C
Sbjct: 89  GWCSNGEECLYLH---------LDPSKQVGVC-AWYNMGFCPLGPIC 125


>SPAC1002.16c |||nicotinic acid plasma membrane transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 499

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 88  LIYSCYSGSVSKETSRNKNKIWIKCRVRFAYMMSTAIMHQSAL 216
           L ++CY  SV   T    N  W+   +   Y  +TAI  Q A+
Sbjct: 379 LYFACYLCSVGVYTGAGLNVTWLSANIAPHYKRATAISLQLAI 421


>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
           Gde1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1076

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 525 GINANLLTASANYAIFSVILNTRRSCVALSIRLAS 629
           G N N + AS+N A+ + +   R  CV + ++L +
Sbjct: 357 GFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGA 391


>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 298

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +3

Query: 579 ILNTRRSCVALSIRLASVLMDRVAISWHNAEEARRREPSSPGGSLGIALIGAD 737
           ++ T+  C+ + + + S ++  V   + N   A    P+ P GS+G  +   D
Sbjct: 197 VITTQAECMWIHLGVISNVLTAVKTVFPNVRYAYTTIPTYPSGSIGFVVASKD 249


>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1036

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 47   FSSANLKFTVSSSTLYIRATVDQFPKKHQEIRIKS 151
            FSS+N    ++SS   I  TV+QF ++   + ++S
Sbjct: 979  FSSSNNLAVITSSLAKIEQTVEQFTEEGFNVNVES 1013


>SPCC613.09 |sen54||tRNA-splicing endonuclease subunit Sen54
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 384

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 510 PLLQTVGRARSCSDLWLVAEEPVH 439
           PL +T+G A S + +WL+ EE ++
Sbjct: 103 PLFKTMGTADSQNRMWLLPEETLY 126


>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
           Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 497

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 467 KSLQDRALPTV*RSGVCKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSV 622
           KSL+   +P +  S   + GD C F   + +     R     T +CR  H+V
Sbjct: 314 KSLEKTLVPYLRISQAVRIGDLCAFTDALSKYEAEFRFDGLYTLICRLRHTV 365


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,355,456
Number of Sequences: 5004
Number of extensions: 65989
Number of successful extensions: 185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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