Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0949
         (837 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    29   0.23 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    29   0.23 
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    26   1.2  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    26   1.2  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    25   2.2  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    25   2.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   3.8  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 587 YKTELCRTFHSVGFCPYGPRCHFV 658
           Y+ ++C+ +   G+C +G  C F+
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFL 199



 Score = 24.6 bits (51), Expect = 3.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 506 SGVCKYGDKCQFAH 547
           +G C +GD C+F H
Sbjct: 187 TGYCGFGDSCKFLH 200


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 587 YKTELCRTFHSVGFCPYGPRCHFV 658
           Y+ ++C+ +   G+C +G  C F+
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFL 199



 Score = 24.6 bits (51), Expect = 3.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 506 SGVCKYGDKCQFAH 547
           +G C +GD C+F H
Sbjct: 187 TGYCGFGDSCKFLH 200


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 431 HHQ*TGSSATSHKSLQDRALPTV 499
           HH   GS ATSH ++Q  A PT+
Sbjct: 24  HH---GSIATSHSTIQHHAAPTI 43


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 431 HHQ*TGSSATSHKSLQDRALPTV 499
           HH   GS ATSH ++Q  A PT+
Sbjct: 24  HH---GSIATSHSTIQHHAAPTI 43


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 431 HHQ*TGSSATSHKSLQDRALPTV 499
           HH   GS ATSH S+Q  A P +
Sbjct: 24  HH---GSIATSHSSIQHHAAPAI 43


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 446 GSSATSHKSLQDRALPTV 499
           GS ATSH S+Q  A P +
Sbjct: 26  GSIATSHSSIQHHAAPAI 43


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 715 PNEPPGDDGSLR 680
           PN+PPG+ GS+R
Sbjct: 464 PNKPPGEPGSVR 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,334
Number of Sequences: 2352
Number of extensions: 17376
Number of successful extensions: 75
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)