Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0949
         (837 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.1  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
 Frame = -3

Query: 751 YDAHRSAPMRAMPNEPPGDDG-----SLRLASSALCHEMATRSIRTEANRMESATQLRLV 587
           +D  R   +R++   PP D+G       R  S A C  + + +   E   + +  Q R  
Sbjct: 180 FDTIRIPIVRSLSKSPPNDEGIETDSDRRKGSIARCWSLDSTAASDEDISLTTHQQKRHK 239

Query: 586 FRMT 575
            R+T
Sbjct: 240 LRVT 243


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 433 PPVNRLLRHQPQVATRPSSADRL 501
           PP   LLR+   +AT P    +L
Sbjct: 827 PPTPNLLRYFASIATNPKEQAQL 849


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,077
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)