BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0948 (834 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_07_0341 - 42855667-42855849,42855933-42855981,42856165-428562... 97 1e-20 07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916,726... 50 2e-06 02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631... 34 0.12 08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675 32 0.65 10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397 30 2.0 04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122 30 2.0 01_06_0250 + 27876358-27879261 30 2.6 06_03_0298 - 19272257-19273714 29 4.6 06_01_0183 + 1422798-1422829,1422989-1423239,1423669-1423945,142... 29 4.6 02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 28 8.0 >01_07_0341 - 42855667-42855849,42855933-42855981,42856165-42856219, 42856290-42856410,42856495-42856532,42856612-42856675, 42856778-42856885,42857066-42857187,42857544-42857616, 42857700-42857776,42858521-42858632 Length = 333 Score = 97.5 bits (232), Expect = 1e-20 Identities = 43/78 (55%), Positives = 59/78 (75%) Frame = +2 Query: 248 KEVTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLG 427 K+++E IN+ +EN KYLPG KL +NV+A PD+ A KDA++L+FV PHQFV IC L+G Sbjct: 53 KKLSESINQANENCKYLPGIKLGANVIADPDLENAVKDANMLVFVTPHQFVEGICKKLVG 112 Query: 428 KIKPTAAALSLIKGFDIA 481 K++P +SLIKG +IA Sbjct: 113 KLRPGTEGISLIKGMEIA 130 Score = 59.7 bits (138), Expect = 3e-09 Identities = 23/49 (46%), Positives = 33/49 (67%) Frame = +3 Query: 96 MADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEII 242 M + KN V ++GSGNWGS ++++ N A L +F D V MWV+EEI+ Sbjct: 1 MENGHAKNLVAVIGSGNWGSVASRLIASNTAKLPSFHDEVRMWVFEEIL 49 >07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916, 7263136-7263259,7263452-7263653,7263743-7263848, 7263979-7264442 Length = 425 Score = 50.4 bits (115), Expect = 2e-06 Identities = 25/75 (33%), Positives = 35/75 (46%) Frame = +2 Query: 254 VTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKI 433 V IN +H N KYL H+LP N+ A +A AD VP QF + + + Sbjct: 144 VCRSINHSHINCKYLRDHRLPENITATTSASDALAGADFCFHAVPVQFSSSFLEGISTHV 203 Query: 434 KPTAAALSLIKGFDI 478 P +SL KG ++ Sbjct: 204 DPKLPFISLSKGLEL 218 >02_04_0245 + 21262645-21262754,21262851-21262997,21263100-21263156, 21263256-21263442,21264700-21264925,21265474-21266003 Length = 418 Score = 34.3 bits (75), Expect = 0.12 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +3 Query: 78 DCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAAS 191 DC +L MAD ++G W S +A+ VG A S Sbjct: 152 DCTVLTMADDSTIKAKVVIGCDGWNSVVARYVGLGAPS 189 >08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675 Length = 264 Score = 31.9 bits (69), Expect = 0.65 Identities = 9/22 (40%), Positives = 17/22 (77%) Frame = -1 Query: 612 DNQWSFRRIFPQQPPMQYWLPL 547 D++W R+F +QPP+++WL + Sbjct: 93 DSEWVICRVFKKQPPIEHWLEM 114 >10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397 Length = 469 Score = 30.3 bits (65), Expect = 2.0 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 735 GFRVSWIGLPTVDYHKRLLVIQTPG 809 G RV++ GLP +H RLL I PG Sbjct: 327 GLRVAYPGLPDHPHHARLLAIANPG 351 >04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122 Length = 294 Score = 30.3 bits (65), Expect = 2.0 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = +3 Query: 672 PWWWTMXTHRNMWSVKDHCGSGFRV--SWIGLPTVDYHK 782 P W +M T ++WS +D G RV W P V Y++ Sbjct: 189 PTWQSMRTFGSLWSAEDWATQGGRVKTDWKQAPFVTYYR 227 >01_06_0250 + 27876358-27879261 Length = 967 Score = 29.9 bits (64), Expect = 2.6 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 476 IAEVVASILYHYYYKMPKNSLCCINGS-QYCIGG 574 ++++VAS + H YY LC + GS Y + G Sbjct: 137 VSQLVASFVLHGYYSSASGELCVVGGSGSYSVDG 170 >06_03_0298 - 19272257-19273714 Length = 485 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +3 Query: 114 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTM---WVYE 233 K KVC+VG G G A A+ + R +S E R + W+Y+ Sbjct: 2 KKKVCVVGGGLVGLAAARELQREGHDVSVLEQRGGVGGQWLYD 44 >06_01_0183 + 1422798-1422829,1422989-1423239,1423669-1423945, 1424827-1425034,1425129-1425203,1425301-1425375, 1425494-1425574,1425666-1425740,1425829-1426002, 1426105-1426134 Length = 425 Score = 29.1 bits (62), Expect = 4.6 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Frame = -3 Query: 616 SRQPMVVSQNFSSATSDAILAPINTAQGIFRHLVIIV-I*DRCHHFGYIKSLNQRQSSCS 440 SR P++++ NF+S + AI + + A + L+ I H + SL ++ + Sbjct: 145 SRSPLLINHNFASRLAAAISSKHHAAAAVEADLLRAERIASVSHQLYSMSSLESARADLA 204 Query: 439 WLYFSKQSRADSSDKLMRHHKY*KISIFCSFNYIWNSNNI-RRQFVARQVFNIF 281 L ++A++ DK+ R +Y S F S + N+ + +AR+VF +F Sbjct: 205 -LLILYLNKAEARDKICRAIQY--GSKFVSNGQPGPAQNVDKSTSLARKVFRLF 255 >02_04_0363 + 22369461-22370127,22370240-22370310,22370412-22370978, 22371056-22371301 Length = 516 Score = 28.3 bits (60), Expect = 8.0 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +3 Query: 93 DMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFE---DRVTMWVYEE 236 D+ + KVC++G+G G A A+ + R +++ E D W+Y++ Sbjct: 7 DVGKPRASRKVCVIGAGMAGLAAARELRREGHAVTVLEQAGDVGGQWLYDD 57 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,157,652 Number of Sequences: 37544 Number of extensions: 512199 Number of successful extensions: 1273 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1231 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1273 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2303447664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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