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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0948
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0341 - 42855667-42855849,42855933-42855981,42856165-428562...    97   1e-20
07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916,726...    50   2e-06
02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631...    34   0.12 
08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675     32   0.65 
10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397     30   2.0  
04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122     30   2.0  
01_06_0250 + 27876358-27879261                                         30   2.6  
06_03_0298 - 19272257-19273714                                         29   4.6  
06_01_0183 + 1422798-1422829,1422989-1423239,1423669-1423945,142...    29   4.6  
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709...    28   8.0  

>01_07_0341 -
           42855667-42855849,42855933-42855981,42856165-42856219,
           42856290-42856410,42856495-42856532,42856612-42856675,
           42856778-42856885,42857066-42857187,42857544-42857616,
           42857700-42857776,42858521-42858632
          Length = 333

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 43/78 (55%), Positives = 59/78 (75%)
 Frame = +2

Query: 248 KEVTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLG 427
           K+++E IN+ +EN KYLPG KL +NV+A PD+  A KDA++L+FV PHQFV  IC  L+G
Sbjct: 53  KKLSESINQANENCKYLPGIKLGANVIADPDLENAVKDANMLVFVTPHQFVEGICKKLVG 112

Query: 428 KIKPTAAALSLIKGFDIA 481
           K++P    +SLIKG +IA
Sbjct: 113 KLRPGTEGISLIKGMEIA 130



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = +3

Query: 96  MADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEII 242
           M +   KN V ++GSGNWGS  ++++  N A L +F D V MWV+EEI+
Sbjct: 1   MENGHAKNLVAVIGSGNWGSVASRLIASNTAKLPSFHDEVRMWVFEEIL 49


>07_01_0874 -
           7261191-7261274,7262291-7262440,7262769-7262916,
           7263136-7263259,7263452-7263653,7263743-7263848,
           7263979-7264442
          Length = 425

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 25/75 (33%), Positives = 35/75 (46%)
 Frame = +2

Query: 254 VTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKI 433
           V   IN +H N KYL  H+LP N+ A     +A   AD     VP QF  +    +   +
Sbjct: 144 VCRSINHSHINCKYLRDHRLPENITATTSASDALAGADFCFHAVPVQFSSSFLEGISTHV 203

Query: 434 KPTAAALSLIKGFDI 478
            P    +SL KG ++
Sbjct: 204 DPKLPFISLSKGLEL 218


>02_04_0245 +
           21262645-21262754,21262851-21262997,21263100-21263156,
           21263256-21263442,21264700-21264925,21265474-21266003
          Length = 418

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 78  DCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAAS 191
           DC +L MAD        ++G   W S +A+ VG  A S
Sbjct: 152 DCTVLTMADDSTIKAKVVIGCDGWNSVVARYVGLGAPS 189


>08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675
          Length = 264

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -1

Query: 612 DNQWSFRRIFPQQPPMQYWLPL 547
           D++W   R+F +QPP+++WL +
Sbjct: 93  DSEWVICRVFKKQPPIEHWLEM 114


>10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397
          Length = 469

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 735 GFRVSWIGLPTVDYHKRLLVIQTPG 809
           G RV++ GLP   +H RLL I  PG
Sbjct: 327 GLRVAYPGLPDHPHHARLLAIANPG 351


>04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122
          Length = 294

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 672 PWWWTMXTHRNMWSVKDHCGSGFRV--SWIGLPTVDYHK 782
           P W +M T  ++WS +D    G RV   W   P V Y++
Sbjct: 189 PTWQSMRTFGSLWSAEDWATQGGRVKTDWKQAPFVTYYR 227


>01_06_0250 + 27876358-27879261
          Length = 967

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 476 IAEVVASILYHYYYKMPKNSLCCINGS-QYCIGG 574
           ++++VAS + H YY      LC + GS  Y + G
Sbjct: 137 VSQLVASFVLHGYYSSASGELCVVGGSGSYSVDG 170


>06_03_0298 - 19272257-19273714
          Length = 485

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +3

Query: 114 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTM---WVYE 233
           K KVC+VG G  G A A+ + R    +S  E R  +   W+Y+
Sbjct: 2   KKKVCVVGGGLVGLAAARELQREGHDVSVLEQRGGVGGQWLYD 44


>06_01_0183 +
           1422798-1422829,1422989-1423239,1423669-1423945,
           1424827-1425034,1425129-1425203,1425301-1425375,
           1425494-1425574,1425666-1425740,1425829-1426002,
           1426105-1426134
          Length = 425

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
 Frame = -3

Query: 616 SRQPMVVSQNFSSATSDAILAPINTAQGIFRHLVIIV-I*DRCHHFGYIKSLNQRQSSCS 440
           SR P++++ NF+S  + AI +  + A  +   L+    I    H    + SL   ++  +
Sbjct: 145 SRSPLLINHNFASRLAAAISSKHHAAAAVEADLLRAERIASVSHQLYSMSSLESARADLA 204

Query: 439 WLYFSKQSRADSSDKLMRHHKY*KISIFCSFNYIWNSNNI-RRQFVARQVFNIF 281
            L     ++A++ DK+ R  +Y   S F S      + N+ +   +AR+VF +F
Sbjct: 205 -LLILYLNKAEARDKICRAIQY--GSKFVSNGQPGPAQNVDKSTSLARKVFRLF 255


>02_04_0363 +
           22369461-22370127,22370240-22370310,22370412-22370978,
           22371056-22371301
          Length = 516

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +3

Query: 93  DMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFE---DRVTMWVYEE 236
           D+   +   KVC++G+G  G A A+ + R   +++  E   D    W+Y++
Sbjct: 7   DVGKPRASRKVCVIGAGMAGLAAARELRREGHAVTVLEQAGDVGGQWLYDD 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,157,652
Number of Sequences: 37544
Number of extensions: 512199
Number of successful extensions: 1273
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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