Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0948
         (834 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.8  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.8  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.8  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   6.6  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 769  TVGRPIQETRNPLPQWSLTL 710
            T+   +QET++ LP W L L
Sbjct: 1016 TIETKLQETKDTLPHWQLQL 1035


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -3

Query: 475  IKSLNQRQSSCSWLYFSKQSRADSSDKLMRHHKY*KISIFCSFNYIW 335
            + S+N+  S+CSW     +S   S     +  +Y    +  S + +W
Sbjct: 1756 VDSMNENASNCSWEAVDDRSAPSSGANSSQQMQYSSSGVGGSTSVLW 1802


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -3

Query: 475  IKSLNQRQSSCSWLYFSKQSRADSSDKLMRHHKY*KISIFCSFNYIW 335
            + S+N+  S+CSW     +S   S     +  +Y    +  S + +W
Sbjct: 1757 VDSMNENASNCSWEAVDDRSAPSSGANSSQQMQYSSSGVGGSTSVLW 1803


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 150 GSAIAKIVGRNAASLSNFEDRVT 218
           GSA++ +     AS+ +F DR+T
Sbjct: 260 GSAVSNLAQLTTASMQSFADRMT 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 896,668
Number of Sequences: 2352
Number of extensions: 20195
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)