Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0948
         (834 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical p...    97   2e-20
Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical pr...    97   2e-20
Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical pr...    97   2e-20
Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical pr...    83   2e-16
Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical pr...    58   1e-08
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    29   3.1  
Z81076-10|CAB03059.1|  394|Caenorhabditis elegans Hypothetical p...    29   5.4  
U29535-4|AAM81112.1|  116|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U29535-3|AAK31458.1|  556|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF014940-1|AAB63933.1|  143|Caenorhabditis elegans Hypothetical ...    28   9.5  

>Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical
           protein K11H3.1d protein.
          Length = 360

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 42/74 (56%), Positives = 59/74 (79%)
 Frame = +2

Query: 248 KEVTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLG 427
           ++++E+IN  HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+G
Sbjct: 49  EKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVG 108

Query: 428 KIKPTAAALSLIKG 469
           KI     A+SLIKG
Sbjct: 109 KIPADTQAISLIKG 122



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 111 PKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEEIIEG 248
           PK KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EEI+ G
Sbjct: 3   PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNG 48



 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +3

Query: 513 ITRCLKIPCAVLMGANIASEVAEEKFCETTIGCR 614
           I   LKI  +VLMGAN+A EVA + FCE TIGC+
Sbjct: 147 IKEILKIEVSVLMGANLAPEVANDNFCEATIGCK 180



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 631 PLMRDIIQTDYFRVRGGGP*XRIEICGALKTIVAVGSGF 747
           PL++ +  TD FR+        +E+CGALK +VA  +GF
Sbjct: 187 PLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGF 225


>Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical
           protein K11H3.1b protein.
          Length = 392

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 42/74 (56%), Positives = 59/74 (79%)
 Frame = +2

Query: 248 KEVTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLG 427
           ++++E+IN  HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+G
Sbjct: 81  EKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVG 140

Query: 428 KIKPTAAALSLIKG 469
           KI     A+SLIKG
Sbjct: 141 KIPADTQAISLIKG 154



 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +3

Query: 60  FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEE 236
           F+YF     I  M+ K    KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EE
Sbjct: 21  FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 76

Query: 237 IIEG 248
           I+ G
Sbjct: 77  IVNG 80



 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +3

Query: 513 ITRCLKIPCAVLMGANIASEVAEEKFCETTIGCR 614
           I   LKI  +VLMGAN+A EVA + FCE TIGC+
Sbjct: 179 IKEILKIEVSVLMGANLAPEVANDNFCEATIGCK 212



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 631 PLMRDIIQTDYFRVRGGGP*XRIEICGALKTIVAVGSGF 747
           PL++ +  TD FR+        +E+CGALK +VA  +GF
Sbjct: 219 PLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGF 257


>Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical
           protein K11H3.1a protein.
          Length = 371

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 42/74 (56%), Positives = 59/74 (79%)
 Frame = +2

Query: 248 KEVTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLG 427
           ++++E+IN  HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+G
Sbjct: 69  EKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVG 128

Query: 428 KIKPTAAALSLIKG 469
           KI     A+SLIKG
Sbjct: 129 KIPADTQAISLIKG 142



 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +3

Query: 60  FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEE 236
           F+YF     I  M+ K    KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EE
Sbjct: 9   FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 64

Query: 237 IIEG 248
           I+ G
Sbjct: 65  IVNG 68



 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +3

Query: 513 ITRCLKIPCAVLMGANIASEVAEEKFCETTIGCR 614
           I   LKI  +VLMGAN+A EVA + FCE TIGC+
Sbjct: 158 IKEILKIEVSVLMGANLAPEVANDNFCEATIGCK 191



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 631 PLMRDIIQTDYFRVRGGGP*XRIEICGALKTIVAVGSGF 747
           PL++ +  TD FR+        +E+CGALK +VA  +GF
Sbjct: 198 PLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGF 236


>Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical
           protein F47G4.3 protein.
          Length = 374

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = +2

Query: 254 VTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKI 433
           + E IN THEN KYLPG ++P NVVA   ++EA + A +LI VVPHQ +  IC  L GK+
Sbjct: 72  IAETINSTHENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKL 131

Query: 434 KPTAAALSLIKG 469
           +  A A+SL KG
Sbjct: 132 QKGAHAISLTKG 143



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +3

Query: 513 ITRCLKIPCAVLMGANIASEVAEEKFCETTIGCRDVMLG 629
           I R L + C+VLMGAN+A EVA+ KFCE TIGC+ +  G
Sbjct: 162 IERALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNG 200



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 114 KNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMW 224
           + K+ IVG GNWGSAIA +VG+   +    F+  V++W
Sbjct: 21  RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIW 58



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 637 MRDIIQTDYFRVRGGGP*XRIEICGALKTIVAVGSGF 747
           ++ +  T  FR+R       +E+CGALK IVA  +GF
Sbjct: 203 LKKVFDTPNFRIRVTTDYEAVELCGALKNIVACAAGF 239


>Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical
           protein K11H3.1c protein.
          Length = 304

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 111 PKNKVCIVGSGNWGSAIAKIVGRNAASL-SNFEDRVTMWVYEEIIEG 248
           PK KV I+GSGNWGSAIA+IVG    S    F+  V MWV+EEI+ G
Sbjct: 3   PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNG 48



 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +3

Query: 513 ITRCLKIPCAVLMGANIASEVAEEKFCETTIGCR 614
           I   LKI  +VLMGAN+A EVA + FCE TIGC+
Sbjct: 91  IKEILKIEVSVLMGANLAPEVANDNFCEATIGCK 124



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 15/26 (57%), Positives = 22/26 (84%)
 Frame = +2

Query: 248 KEVTEIINETHENVKYLPGHKLPSNV 325
           ++++E+IN  HEN+KYLPG  LP+NV
Sbjct: 49  EKLSEVINNRHENIKYLPGKVLPNNV 74



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 631 PLMRDIIQTDYFRVRGGGP*XRIEICGALKTIVAVGSGF 747
           PL++ +  TD FR+        +E+CGALK +VA  +GF
Sbjct: 131 PLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGF 169


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -3

Query: 682  HHHGP*SSLSV*YPALTEPSIT--SRQPMVVSQNFSSATSDAILAPINTAQGI 530
            HHH P S+ SV     T PS T  +   M  S   SSA++    +P  T+ GI
Sbjct: 1386 HHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAATSSGI 1438


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -3

Query: 682  HHHGP*SSLSV*YPALTEPSIT--SRQPMVVSQNFSSATSDAILAPINTAQGI 530
            HHH P S+ SV     T PS T  +   M  S   SSA++    +P  T+ GI
Sbjct: 1386 HHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAATSSGI 1438


>Z81076-10|CAB03059.1|  394|Caenorhabditis elegans Hypothetical
           protein F35C5.9 protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 630 SVNAGYHTDRLLQGPWWWTMXTHRNMWSVKDHCGS 734
           ++NA Y+      G WWW   + + +W +  + G+
Sbjct: 314 TINAFYNGLTNYNGTWWWDQPSGQPLWPLNPNSGA 348


>U29535-4|AAM81112.1|  116|Caenorhabditis elegans Hypothetical
           protein C25H3.6b protein.
          Length = 116

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +2

Query: 401 RTICSTLLGKIKPTAAALSLIKGFDIAEVVASILYHYYYKMP 526
           +T+C +LL +++P   +  +++   I  VV  +   Y+ K P
Sbjct: 24  QTLCESLLNEVRPLVTSREILEETRIGFVVNQLRRQYFKKWP 65


>U29535-3|AAK31458.1|  556|Caenorhabditis elegans Hypothetical
           protein C25H3.6a protein.
          Length = 556

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +2

Query: 401 RTICSTLLGKIKPTAAALSLIKGFDIAEVVASILYHYYYKMP 526
           +T+C +LL +++P   +  +++   I  VV  +   Y+ K P
Sbjct: 24  QTLCESLLNEVRPLVTSREILEETRIGFVVNQLRRQYFKKWP 65


>AF014940-1|AAB63933.1|  143|Caenorhabditis elegans Hypothetical
           protein W02D7.3 protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -2

Query: 803 SLDDQQPFVVIHRREANPGNPEPTATMVF--NAP--HIS-MRXHGPPP 675
           S+D +     ++    NPG  +P  TM F  NAP  H +  + H PPP
Sbjct: 34  SIDLENEIPEMYNTSLNPGIHDPDMTMFFNRNAPPFHTNYAKRHSPPP 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,259,395
Number of Sequences: 27780
Number of extensions: 421380
Number of successful extensions: 1163
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)