BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0946 (823 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 60 3e-10 SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 38 0.002 SPCC550.08 |||N-acetyltransferase |Schizosaccharomyces pombe|chr... 27 2.4 SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 3.2 SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 9.8 SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 25 9.8 SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 25 9.8 >SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 324 Score = 60.5 bits (140), Expect = 3e-10 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = +3 Query: 576 LPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLG 710 L W QDN Y+ G+RPP SF C SIF +H E+ NIWTHL G Sbjct: 54 LEPWQQDNQYIISGYRPPSFSFYLCVKSIFHVHNESVNIWTHLFG 98 >SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 442 Score = 37.9 bits (84), Expect = 0.002 Identities = 20/43 (46%), Positives = 24/43 (55%) Frame = +3 Query: 576 LPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHL 704 LP +N Y+ +G+R S CF SI H ET NIWTHL Sbjct: 174 LPVQWHNNPYIIRGYRF-YTSKRKCFRSILSWHNETFNIWTHL 215 >SPCC550.08 |||N-acetyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 247 Score = 27.5 bits (58), Expect = 2.4 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +3 Query: 507 REQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLH 611 +EQ + ++RK+ E +N+C LP +L ++ +LH Sbjct: 140 KEQGKGYLRKLIEPIFNICDQEGLPIYL-ESSHLH 173 >SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 332 Score = 27.1 bits (57), Expect = 3.2 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +1 Query: 391 CPLPSTPEDQHLLDAEMAEVLKAGVLSDEIDLGALAHNAA 510 CPL TP+ +HL+D ++ +K GV G L A Sbjct: 206 CPL--TPDTEHLVDEKLLASMKKGVKIINTSRGGLVDTKA 243 >SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1150 Score = 25.4 bits (53), Expect = 9.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 707 WAAWHSLASRFYFLSRPIYEIPMQEKVIFRVFL 805 WA SL SRF LS I I + + IF +L Sbjct: 187 WAVLSSLDSRFLQLSEQIRSIKLFDSSIFSDYL 219 >SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1|Schizosaccharomyces pombe|chr 1|||Manual Length = 431 Score = 25.4 bits (53), Expect = 9.8 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 Query: 334 SPHRDPILACVAIHRRT 284 SPH +PILA + RRT Sbjct: 334 SPHEEPILASTSADRRT 350 >SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 403 Score = 25.4 bits (53), Expect = 9.8 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 277 QSVSSDGLRRRQGW-DPDAESL 339 Q + D +RR QGW PD E+L Sbjct: 354 QQIKEDEIRRAQGWFFPDKEAL 375 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,494,096 Number of Sequences: 5004 Number of extensions: 73577 Number of successful extensions: 216 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 216 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 402440190 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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