BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0946 (823 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 27 0.70 AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 27 0.70 AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 1.6 AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 4.9 >AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylcholine receptor subunitalpha 4 protein. Length = 555 Score = 27.1 bits (57), Expect = 0.70 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -3 Query: 560 HVPRRLPYFANEFLGLFAALWASAPKSISSDNTPAFKTSAISAS 429 H P +LP+ +E L + A + P I S PAFK A S S Sbjct: 424 HGPIQLPHSESEELSMSTAADTAVPSGIKS---PAFKQPAFSHS 464 >AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylcholine receptor subunitalpha 4 protein. Length = 555 Score = 27.1 bits (57), Expect = 0.70 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -3 Query: 560 HVPRRLPYFANEFLGLFAALWASAPKSISSDNTPAFKTSAISAS 429 H P +LP+ +E L + A + P I S PAFK A S S Sbjct: 424 HGPIQLPHSESEELSMSTAADTAVPSGIKS---PAFKQPAFSHS 464 >AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. Length = 412 Score = 25.8 bits (54), Expect = 1.6 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 565 WHTFHDASHTLRTNSSACSRR--YGPVLPNQSHRITRQL 455 W +F H +R N +AC R GP P+ S + +QL Sbjct: 63 WESFLSQFHQVRENLTACQERAAAGPA-PDPSSQFCQQL 100 >AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase protein. Length = 1248 Score = 24.2 bits (50), Expect = 4.9 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 469 ITRQLSKLQPFRHPTDVDPPVLKA 398 I + L +LQP R D DP VLK+ Sbjct: 363 IRKVLYRLQPSRTAQDRDPVVLKS 386 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 897,547 Number of Sequences: 2352 Number of extensions: 19418 Number of successful extensions: 46 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 46 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 87318630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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