Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0946
         (823 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...   107   9e-24
U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...   107   1e-23
AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical ...    47   1e-05
U64854-3|AAB18315.2|  304|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z92803-8|CAB07245.1|  814|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U94835-1|AAC47510.1|  814|Caenorhabditis elegans multiple exosto...    29   4.0  
AB077851-1|BAB83878.1|  814|Caenorhabditis elegans heparan sulfa...    29   4.0  
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    28   7.0  
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    28   7.0  
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    28   7.0  
U41030-8|AAA82366.3|  272|Caenorhabditis elegans Hypothetical pr...    28   9.3  

>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score =  107 bits (257), Expect = 9e-24
 Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +3

Query: 528 VRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLL 707
           +++ WEA W   +F  LP WLQDN+YL  GHRPPLPSFS+CF SIF +HTETGNIWTH+ 
Sbjct: 260 IKRFWEARWKATNFETLPEWLQDNEYLRTGHRPPLPSFSSCFKSIFALHTETGNIWTHMY 319

Query: 708 GLRGIHWRRDSTFCLVPSTKFQCKRKL-YSXFF 803
           G     +     F   P  + Q   KL YS FF
Sbjct: 320 GCVAF-FGIGIWFLTRPHDQMQWVEKLIYSAFF 351


>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score =  107 bits (256), Expect = 1e-23
 Identities = 48/99 (48%), Positives = 59/99 (59%)
 Frame = +3

Query: 507 REQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETG 686
           R +    V K +EA W V  + HLP WLQDN++L  GHRPPLPSFS CF SI+ +HTETG
Sbjct: 143 RSEQTGIVTKTYEARWKVLKYEHLPEWLQDNEFLRHGHRPPLPSFSECFKSIWSLHTETG 202

Query: 687 NIWTHLLGLRGIHWRRDSTFCLVPSTKFQCKRKLYSXFF 803
           NIWTHL+G     +     F   P    Q + K+   FF
Sbjct: 203 NIWTHLIGCVAFFFLA-CWFLTRPDNHIQFQEKVVFSFF 240


>AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical
           protein Y67A10A.8 protein.
          Length = 328

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +3

Query: 576 LPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGLRGIHWRRDST-FCL 752
           L + L  NDY+   +RPP  +   C  S F I+ ET NIW+HLLG     +++ +T + +
Sbjct: 28  LHKTLWQNDYVINHYRPPAMTKKMCAKSAFHINNETINIWSHLLGFIYFTYQQYNTNYIV 87

Query: 753 VPS 761
           +PS
Sbjct: 88  LPS 90


>U64854-3|AAB18315.2|  304|Caenorhabditis elegans Hypothetical
           protein K11C4.2 protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 615 GHRPPLPSFSACFASIFRIHTETGNIWTHLL 707
           G+RP     S  F S F  H E  N+WTH +
Sbjct: 20  GYRPLNQPPSFYFRSAFSSHNEVFNVWTHFI 50


>Z92803-8|CAB07245.1|  814|Caenorhabditis elegans Hypothetical
           protein K01G5.6 protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -1

Query: 574 CLKWHTFHDASHTLRTNSSACSRRYGPVLPNQSHRITRQLSKLQPFRHPTDVDPPVLKAA 395
           C+K H  +  +    T +S       P++  QS  I  Q SK++ F  P DV+   ++  
Sbjct: 214 CIKIHISNGIASPNTTFNSILFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKV 273

Query: 394 DI 389
           D+
Sbjct: 274 DL 275


>Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical
           protein ZK632.11 protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = -3

Query: 737 IATPMNATQPKEMRPNVTCLSVDSEN*CKTCAERR*RRSMS 615
           ++TP+   +   +R  ++C + D E+  + C +R+  R +S
Sbjct: 93  VSTPVTVKKENNIRKKISCFNCDGEHNLRDCTQRKDFRRIS 133


>U94835-1|AAC47510.1|  814|Caenorhabditis elegans multiple exostoses
           homolog 2 protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -1

Query: 574 CLKWHTFHDASHTLRTNSSACSRRYGPVLPNQSHRITRQLSKLQPFRHPTDVDPPVLKAA 395
           C+K H  +  +    T +S       P++  QS  I  Q SK++ F  P DV+   ++  
Sbjct: 214 CIKIHISNGIASPNTTFNSILFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKV 273

Query: 394 DI 389
           D+
Sbjct: 274 DL 275


>AB077851-1|BAB83878.1|  814|Caenorhabditis elegans heparan sulfate
           GlcNAc transferase-I/II protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -1

Query: 574 CLKWHTFHDASHTLRTNSSACSRRYGPVLPNQSHRITRQLSKLQPFRHPTDVDPPVLKAA 395
           C+K H  +  +    T +S       P++  QS  I  Q SK++ F  P DV+   ++  
Sbjct: 214 CIKIHISNGIASPNTTFNSILFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKV 273

Query: 394 DI 389
           D+
Sbjct: 274 DL 275


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 254 PTSSLVSITRRWEIGNHWPP 195
           PTS  +S T++W+  N WPP
Sbjct: 263 PTSLAMSSTQQWDKENAWPP 282


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 254 PTSSLVSITRRWEIGNHWPP 195
           PTS  +S T++W+  N WPP
Sbjct: 434 PTSLAMSSTQQWDKENAWPP 453


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 254 PTSSLVSITRRWEIGNHWPP 195
           PTS  +S T++W+  N WPP
Sbjct: 434 PTSLAMSSTQQWDKENAWPP 453


>U41030-8|AAA82366.3|  272|Caenorhabditis elegans Hypothetical
           protein C44C1.1 protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 631 YLRSAHVLHQFSESTLRQVTFGRISLGCVAFIGVAILLSVSSH 759
           Y+ S HVLH  SE        GR+ + C++ +G  I     +H
Sbjct: 194 YIVSTHVLHWESEQDRNVAVDGRV-ICCISILGAQIWSQTYAH 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,562,307
Number of Sequences: 27780
Number of extensions: 426103
Number of successful extensions: 1096
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)