Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0946
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   1.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.9  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 187 KGHGGQWLPISHLRVIETSEDVGVESDIGSQSVSSDGLRRR 309
           +G  G+ L IS + + + + DV +   +G Q+ + DGLRRR
Sbjct: 401 EGLTGRGLFISDIPLHDATRDVIL---VGEQARAQDGLRRR 438


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 61  KLVVCRSDFYRTKTTQSEVIGCK 129
           +L V  SD+   +  Q+E IGCK
Sbjct: 600 ELFVMVSDYKDDRVEQNEPIGCK 622


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 554 PRRLPYFANEFLGLFAALWASAP 486
           P RLP F +E   L    W+  P
Sbjct: 821 PERLPSFDDECWRLMEQCWSGEP 843


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 554 PRRLPYFANEFLGLFAALWASAP 486
           P RLP F +E   L    W+  P
Sbjct: 859 PERLPSFDDECWRLMEQCWSGEP 881


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,285
Number of Sequences: 438
Number of extensions: 4960
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)