Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0945
(841 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 33 0.21
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.37
04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735... 33 0.37
07_01_0170 + 1193510-1194091 30 2.0
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 30 2.6
02_05_0464 - 29256887-29257765,29258455-29258538 30 2.6
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 2.6
01_01_0070 - 542603-542686,542803-543441 29 3.5
04_04_0462 + 25393733-25394347 29 4.6
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 29 4.6
01_06_0640 + 30779457-30779623,30779707-30779828,30779959-307800... 29 4.6
01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190 29 4.6
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 29 6.1
11_03_0010 - 8922361-8922375,8923888-8924610 29 6.1
11_01_0422 + 3246528-3248606 29 6.1
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 29 6.1
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 29 6.1
02_02_0349 + 9237537-9238334 29 6.1
11_01_0766 - 6432455-6433342 28 8.1
09_01_0013 - 355103-355435 28 8.1
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 28 8.1
07_01_0076 + 562248-562430,562540-562637,562887-562954,563376-56... 28 8.1
06_03_0332 + 19652207-19652995 28 8.1
04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355... 28 8.1
02_05_0683 + 30877731-30878243 28 8.1
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 28 8.1
>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
Length = 394
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +3
Query: 285 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRP 407
P PA S A + AT SPR A +PPW T PP I P
Sbjct: 91 PMPTPAASSA-LAPATSSPRPASPPTPPWTTAPPPGIAAPP 130
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 339 PRLAPARSPPWGTTSPPRITRRPCPTD 419
P++ P SPP T SPP IT P P D
Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 339 PRLAPARSPPWGTTSPPRITRRPCPTD 419
P + P SPP T SPP IT P P +
Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 339 PRLAPARSPPWGTTSPPRITRRPCPTD 419
P +AP SPP SPP IT P P +
Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 339 PRLAPARSPPWGTTSPPRITRRPCPTD 419
P + P SPP SPP+IT P P +
Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 339 PRLAPARSPPWGTTSPPRITRRPCPTD 419
P + P SPP T PP IT P P +
Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 285 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTD 419
P +NP S I + P + P SPP SPP IT P P +
Sbjct: 492 PEINPYPSPPEIVPSP--PEITPYPSPPEIVPSPPEITPYPSPPE 534
>04_04_0140 -
23073032-23073130,23073270-23073338,23073448-23073539,
23073637-23074550,23074646-23074779,23075003-23075058,
23077556-23077646
Length = 484
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 142 HRAXXRSTNARTFGVRVVSCGEGFVDPRRAVWWAARLHPI 23
HR+ + V GEG +PRRA WW A H +
Sbjct: 35 HRSDLSMVTSSVLPKVVDDAGEGEANPRRAKWWYATFHSV 74
>07_01_0170 + 1193510-1194091
Length = 193
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 322 PIGAYERAG-FNPGNVCRVCPGQPQLSYLGSRLRVVCCCISCSRALASVSEPSHTCTCSG 146
P+ A A PG + V PG+ + + R V + S ALA+ S S T C G
Sbjct: 63 PVAAVAAAAELRPGQIYFVLPGEVRRRGM-RREEVAALAVKASAALAAASSSSTTSGCGG 121
Query: 145 WHR 137
R
Sbjct: 122 GRR 124
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 336 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVAQCT 452
SPR + + +PP SP RI RRP PT LVA V+ T
Sbjct: 302 SPRRSSSPAPP---PSPRRILRRPRPTLELVAGAVSITT 337
>02_05_0464 - 29256887-29257765,29258455-29258538
Length = 320
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 VGHGLLVIRGGDVVPQGGLLA---GASRGDHVALPIGA 311
+G G++ I GG V L A A GDH+ALP GA
Sbjct: 220 MGAGMMGIGGGGVAEYHALSALRFAAGLGDHLALPFGA 257
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 261 PGQTRQTLPGLNPARSYAPIGRATWSPRLA---PARSPPWGTTSPPRITRRPC 410
P T + + L P A G W+ +A PA PP +SPP + PC
Sbjct: 170 PSATTKPVQKLRPGSRTAWAGHPKWALPVAYEMPAPPPPHAASSPPLPSSSPC 222
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 279 TLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 413
T P +P P AT +P +APA++PP P P P
Sbjct: 43 TAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTP 87
>04_04_0462 + 25393733-25394347
Length = 204
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 376 VPQGGLLAGASRGDHVALPIGAYERAGFNPGNVCRVCPGQPQ 251
VP GG G G H + +Y A G+V RVC +PQ
Sbjct: 96 VPPGGKAGGVCLGGHSVAAVVSYGGAFLGEGSVGRVCV-EPQ 136
>02_05_0272 -
27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = -1
Query: 334 HVALP---IGAYERAGFNPGNVCRVCPGQPQLSYLGSRLRVVCCCISCSRALASVSEPSH 164
H LP +G +R + P VC++ GQ L + ++C R +
Sbjct: 491 HTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILQ 550
Query: 163 TCTCSGWHRAXXRSTNARTFGVRV 92
T H A + A+ FG+R+
Sbjct: 551 TV----HHNAYHQDPYAQEFGIRI 570
>01_06_0640 +
30779457-30779623,30779707-30779828,30779959-30780014,
30780147-30780254
Length = 150
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 264 GQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRR 404
G R+ L GL A S + +P A ARSP S PR TRR
Sbjct: 6 GGARRALAGLRSASSSRAFSQP--APAAAAARSPELAAFSLPRSTRR 50
>01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190
Length = 393
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -1
Query: 292 NPGNVCRVCPGQPQLSYLGSRLRVVC---CCISCSRALASVSEP 170
+PG CRVC L L SRL +C C A A+ + P
Sbjct: 214 SPGTRCRVCSDIASLDGLYSRLATLCTISCWAHADHAAAAAAHP 257
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 616 AVGSGGTPGWPCDPQNIVVLPQA 684
AVGS G+PC P I++L +A
Sbjct: 101 AVGSARKGGYPCPPYKIIILDEA 123
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 364 GLLAG--ASRGDHVALPIGAY-ERAGFNPGNVC 275
G AG A D A IGAY AG+NPG +C
Sbjct: 61 GAAAGMAADAADSAAANIGAYIPEAGYNPGKLC 93
>11_01_0422 + 3246528-3248606
Length = 692
Score = 28.7 bits (61), Expect = 6.1
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 ATADAAADHPQTTAQIR*LWLARTDPADV-ARV-ESRTFICSDRESDVVPSARAGQKSAL 370
+T DAAAD P TT L +T+ A V +R+ ES I D ES + A AG++
Sbjct: 397 STTDAAADEPDTTTDA--LTDIKTELASVRSRLGESAAAIFCDLESSI--RADAGKQPVP 452
Query: 371 GNYISP 388
G + P
Sbjct: 453 GGAVHP 458
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 288 GLNPARSYAPIGRATWSPRLAPARSPPWG 374
G++P+R A +P LAPA +P WG
Sbjct: 163 GVSPSRVAVTAAAAEPTPALAPAPAPEWG 191
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = -1
Query: 334 HVALP---IGAYERAGFNPGNVCRVCPGQPQLSYLGSRLRVVCCCISCSRALASVSEPSH 164
H LP +G +R + P VC++ GQ L + ++C R +
Sbjct: 608 HTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILR 667
Query: 163 TCTCSGWHRAXXRSTNARTFGVRV 92
T + H A A+ FG+++
Sbjct: 668 TVS----HNAYHEDQYAQEFGIKI 687
>02_02_0349 + 9237537-9238334
Length = 265
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 116 RANLWSESGQLWGRLRRPSQSSLVGGAA 33
+A W GQ+WG R S GGAA
Sbjct: 25 QAGAWMRGGQIWGEPARGSGGLRTGGAA 52
>11_01_0766 - 6432455-6433342
Length = 295
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 518 ESVILHQSSREEIPQGPSRTVSRTLCDLSCNQGICRTRPSRN 393
E ++ +S ++ +GP+ T LC+ C G C RN
Sbjct: 145 EKLLAIHASLTQLLRGPTGTRRPPLCNTCCQDGSCTEEKKRN 186
>09_01_0013 - 355103-355435
Length = 110
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 300 ARSYAPIGRATWSPRLAPARSPPW 371
AR A GR W PR P R P W
Sbjct: 28 ARGGAAGGRRAWRPRWRPQRRPRW 51
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 295 IPHVHMLRSGERRGPLGSRRPEVRPGELH 381
IPH L + + P+ S++P+VR E+H
Sbjct: 158 IPHSEHLNNDLTQDPVASKKPKVRKKEIH 186
>07_01_0076 +
562248-562430,562540-562637,562887-562954,563376-563421,
563661-563767,563978-564027,564120-564202,564705-564819
Length = 249
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 813 QPSQSXGERANQLIPRRDESTSCPNKTVAA 724
Q + G++ NQL+ R + T CPN T ++
Sbjct: 92 QSCREFGKQYNQLLSRSTQPTFCPNATTSS 121
>06_03_0332 + 19652207-19652995
Length = 262
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 312 APIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 413
A I A SP ++P+ + PW R++R P P
Sbjct: 215 AAIDAAARSPAMSPSPTRPWTPERVARVSRSPSP 248
>04_04_0151 +
23134467-23134627,23134657-23134803,23135413-23135512,
23135554-23135638,23135767-23136419
Length = 381
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +3
Query: 261 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPP------RITRRPCPTDS 422
P T + + G R G PRL+ PP ++SP RI RRP PT
Sbjct: 225 PRSTSELVAGDRVLRRDLVTGGHVHRPRLSRWLRPPRRSSSPVPPLSLRRILRRPRPTPE 284
Query: 423 LVA*EVAQCT 452
LVA V+ T
Sbjct: 285 LVAGAVSVTT 294
>02_05_0683 + 30877731-30878243
Length = 170
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 388 GGDVVPQGGLLAG-ASRGDHVALPIGAYERAGFNPGNVC 275
GG GG A A+RG VA+P+ A A + GN C
Sbjct: 126 GGSGASDGGSTAAMAARGSTVAVPVAAAAVARGSRGNTC 164
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 631 GTPGWPCDPQNIVVLP 678
GT G PCDP +VVLP
Sbjct: 364 GTCGCPCDPPAVVVLP 379
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,003,403
Number of Sequences: 37544
Number of extensions: 610653
Number of successful extensions: 2339
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2336
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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