BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0945 (841 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 103 2e-22 Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 103 2e-22 Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 103 2e-22 Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 103 2e-22 AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 92 4e-19 AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 92 4e-19 AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 66 3e-11 AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 42 5e-04 Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 31 1.3 AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 3.1 AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 5.4 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 5.4 AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 29 5.4 U41532-5|AAF99906.2| 111|Caenorhabditis elegans Hypothetical pr... 28 7.2 U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical pr... 28 7.2 AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 28 7.2 AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 28 7.2 >Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical protein R11A5.4b protein. Length = 582 Score = 103 bits (247), Expect = 2e-22 Identities = 44/85 (51%), Positives = 61/85 (71%) Frame = +2 Query: 254 WLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCM 433 ++ RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM Sbjct: 106 YICRTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCM 165 Query: 434 RGRTMYVIPFSMGPVGSPLSKIGVE 508 GR MYVIPFSMGPVG PLSKIG++ Sbjct: 166 AGRIMYVIPFSMGPVGGPLSKIGIQ 190 Score = 56.8 bits (131), Expect = 2e-08 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G + ++TDS YVV SMR+MTR+ V D L ++ FV C+H+VG Sbjct: 178 GPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDVWDAL-GNQDFVRCIHSVGLPRPVKQR 236 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 237 VINHWPCNPERVLIAHRPP-EREIWSFGSGYGGNSLLGKK 275 Score = 31.9 bits (69), Expect = 0.58 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +3 Query: 96 LTPKVRAFVERXLALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDN 251 L KV+ F+ L +P + +CDGS+ EA +L Y+N Sbjct: 53 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYEN 104 >Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical protein R11A5.4d protein. Length = 618 Score = 103 bits (247), Expect = 2e-22 Identities = 44/85 (51%), Positives = 61/85 (71%) Frame = +2 Query: 254 WLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCM 433 ++ RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM Sbjct: 70 YICRTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCM 129 Query: 434 RGRTMYVIPFSMGPVGSPLSKIGVE 508 GR MYVIPFSMGPVG PLSKIG++ Sbjct: 130 AGRIMYVIPFSMGPVGGPLSKIGIQ 154 Score = 56.8 bits (131), Expect = 2e-08 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G + ++TDS YVV SMR+MTR+ V D L ++ FV C+H+VG Sbjct: 142 GPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDVWDAL-GNQDFVRCIHSVGLPRPVKQR 200 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 201 VINHWPCNPERVLIAHRPP-EREIWSFGSGYGGNSLLGKK 239 Score = 31.9 bits (69), Expect = 0.58 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +3 Query: 96 LTPKVRAFVERXLALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDN 251 L KV+ F+ L +P + +CDGS+ EA +L Y+N Sbjct: 17 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYEN 68 >Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical protein R11A5.4c protein. Length = 587 Score = 103 bits (247), Expect = 2e-22 Identities = 44/85 (51%), Positives = 61/85 (71%) Frame = +2 Query: 254 WLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCM 433 ++ RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM Sbjct: 39 YICRTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCM 98 Query: 434 RGRTMYVIPFSMGPVGSPLSKIGVE 508 GR MYVIPFSMGPVG PLSKIG++ Sbjct: 99 AGRIMYVIPFSMGPVGGPLSKIGIQ 123 Score = 56.8 bits (131), Expect = 2e-08 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G + ++TDS YVV SMR+MTR+ V D L ++ FV C+H+VG Sbjct: 111 GPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDVWDAL-GNQDFVRCIHSVGLPRPVKQR 169 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 170 VINHWPCNPERVLIAHRPP-EREIWSFGSGYGGNSLLGKK 208 >Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical protein R11A5.4a protein. Length = 654 Score = 103 bits (247), Expect = 2e-22 Identities = 44/85 (51%), Positives = 61/85 (71%) Frame = +2 Query: 254 WLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCM 433 ++ RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM Sbjct: 106 YICRTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCM 165 Query: 434 RGRTMYVIPFSMGPVGSPLSKIGVE 508 GR MYVIPFSMGPVG PLSKIG++ Sbjct: 166 AGRIMYVIPFSMGPVGGPLSKIGIQ 190 Score = 56.8 bits (131), Expect = 2e-08 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G + ++TDS YVV SMR+MTR+ V D L ++ FV C+H+VG Sbjct: 178 GPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDVWDAL-GNQDFVRCIHSVGLPRPVKQR 236 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 237 VINHWPCNPERVLIAHRPP-EREIWSFGSGYGGNSLLGKK 275 Score = 31.9 bits (69), Expect = 0.58 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +3 Query: 96 LTPKVRAFVERXLALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDN 251 L KV+ F+ L +P + +CDGS+ EA +L Y+N Sbjct: 53 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYEN 104 >AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical protein W05G11.6d protein. Length = 594 Score = 92.3 bits (219), Expect = 4e-19 Identities = 41/85 (48%), Positives = 57/85 (67%) Frame = +2 Query: 254 WLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCM 433 +L RTDP DVARVES+T++ + + D V G + +G ++S + + RFPGCM Sbjct: 93 YLCRTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRFPGCM 152 Query: 434 RGRTMYVIPFSMGPVGSPLSKIGVE 508 GR MYV+P+SMGP+G PLSK G+E Sbjct: 153 AGRPMYVVPYSMGPIGGPLSKNGIE 177 Score = 65.3 bits (152), Expect = 5e-11 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G ++ +TDSPYVV MR MTR+G KVL+ L D FV C+H+VG Sbjct: 165 GPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEAL-GDNDFVRCIHSVGLPRPVKQK 223 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 224 VINHWPCNPEKVMIAHRPK-EREIWSFGSGYGGNSILGKK 262 Score = 33.9 bits (74), Expect = 0.14 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 93 TLTPKVRAFVERXLALCQPEHVHVCDGSETE 185 +L+PKV+ FV L P +++CDGS+ E Sbjct: 39 SLSPKVQRFVAEKAELMNPAGIYICDGSQKE 69 >AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical protein W05G11.6a protein. Length = 651 Score = 92.3 bits (219), Expect = 4e-19 Identities = 41/85 (48%), Positives = 57/85 (67%) Frame = +2 Query: 254 WLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCM 433 +L RTDP DVARVES+T++ + + D V G + +G ++S + + RFPGCM Sbjct: 93 YLCRTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRFPGCM 152 Query: 434 RGRTMYVIPFSMGPVGSPLSKIGVE 508 GR MYV+P+SMGP+G PLSK G+E Sbjct: 153 AGRPMYVVPYSMGPIGGPLSKNGIE 177 Score = 65.3 bits (152), Expect = 5e-11 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G ++ +TDSPYVV MR MTR+G KVL+ L D FV C+H+VG Sbjct: 165 GPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEAL-GDNDFVRCIHSVGLPRPVKQK 223 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 224 VINHWPCNPEKVMIAHRPK-EREIWSFGSGYGGNSILGKK 262 Score = 33.9 bits (74), Expect = 0.14 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 93 TLTPKVRAFVERXLALCQPEHVHVCDGSETE 185 +L+PKV+ FV L P +++CDGS+ E Sbjct: 39 SLSPKVQRFVAEKAELMNPAGIYICDGSQKE 69 >AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical protein W05G11.6b protein. Length = 541 Score = 66.1 bits (154), Expect = 3e-11 Identities = 26/52 (50%), Positives = 36/52 (69%) Frame = +2 Query: 353 GQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVE 508 G + +G ++S + + RFPGCM GR MYV+P+SMGP+G PLSK G+E Sbjct: 16 GVRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIE 67 Score = 65.3 bits (152), Expect = 5e-11 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Frame = +1 Query: 469 GPCGISSLEDWCRITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 630 GP G ++ +TDSPYVV MR MTR+G KVL+ L D FV C+H+VG Sbjct: 55 GPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEAL-GDNDFVRCIHSVGLPRPVKQK 113 Query: 631 GTPGWPCDPQNIVVLPQAG*QRDSKLTAVDMGGNSFVGAR 750 WPC+P+ +++ + +R+ GGNS +G + Sbjct: 114 VINHWPCNPEKVMIAHRPK-EREIWSFGSGYGGNSILGKK 152 >AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical protein H04M03.1 protein. Length = 624 Score = 41.9 bits (94), Expect = 5e-04 Identities = 19/45 (42%), Positives = 29/45 (64%) Frame = +2 Query: 374 NYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVE 508 +Y+S ++ + F M GRTMYV+PFSMG +GS + +GV+ Sbjct: 158 HYMSQKMFDFNKTKLFDCSMSGRTMYVVPFSMGTIGSRRAVVGVQ 202 Score = 33.5 bits (73), Expect = 0.19 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +1 Query: 505 RITDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG 624 +ITD P +V ++R R+ + + D + F+ C+H +G Sbjct: 202 QITDDPVLVLNLRTTFRVLSNIWDHIAATTNFLRCVHTIG 241 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 87 LTTLTPKVRAFVERXLALCQPEHVHVCDGSETEAR 191 LT L+P+V F+ + L P V +C+GS EA+ Sbjct: 50 LTWLSPEVLTFLNDCVQLMTPCAVRICNGSVFEAQ 84 >Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical protein T23G5.2a protein. Length = 719 Score = 30.7 bits (66), Expect = 1.3 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Frame = +2 Query: 407 VSDRFPGCMR-----GRTMYVIPFSMGPVGSPLSKIGVESRIRLTWFFLCES*LE 556 + FPGC GR MY++ F L GVE+ ++LT +CE L+ Sbjct: 323 IKQYFPGCWHNSDKAGRPMYILRFGQLDTKGMLRSCGVENLVKLT-LSICEDGLQ 376 >AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical protein Y51H7C.1 protein. Length = 448 Score = 29.5 bits (63), Expect = 3.1 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = +3 Query: 261 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDS 422 P T PG P ++ P +T P PW T+PP T R P S Sbjct: 140 PSVTPGGRPGSTPPATFPPGSISTVRYTPGPTPPGPWTYTAPPYYTYRTVPPAS 193 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 28.7 bits (61), Expect = 5.4 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -2 Query: 813 QPSQSXGERANQLIPRRDESTSCPNKTVAAHIHCRKLTISLLAGLWKYDDVLRVAGPARS 634 +P + G QL P + +KT +AH KL + AG K + LR+ G A+ Sbjct: 15320 KPIKEDGNVKAQLSPDGTAQLTI-SKTDSAHSGIYKLNVENDAGKGKVEIALRIKGAAKG 15378 Query: 633 ATG 625 A G Sbjct: 15379 APG 15381 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 28.7 bits (61), Expect = 5.4 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -2 Query: 813 QPSQSXGERANQLIPRRDESTSCPNKTVAAHIHCRKLTISLLAGLWKYDDVLRVAGPARS 634 +P + G QL P + +KT +AH KL + AG K + LR+ G A+ Sbjct: 15320 KPIKEDGNVKAQLSPDGTAQLTI-SKTDSAHSGIYKLNVENDAGKGKVEIALRIKGAAKG 15378 Query: 633 ATG 625 A G Sbjct: 15379 APG 15381 >AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical protein F07B7.14 protein. Length = 401 Score = 28.7 bits (61), Expect = 5.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 389 PDYEKAVSDRFPGCMRGRTMYVIPFSMGPVG 481 P EK +S R C R RT +P S+GP G Sbjct: 94 PPKEK-ISTRLASCRRPRTSSSLPLSLGPSG 123 >U41532-5|AAF99906.2| 111|Caenorhabditis elegans Hypothetical protein F11D5.6 protein. Length = 111 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 321 GRATWSPRLAPARSPPWGTTSPPRITRRPCPTDSL 425 GR + +P PA PP S P +R C D+L Sbjct: 73 GRLSKTPSSTPAPPPPQPVVSTPAKAKRQCKFDNL 107 >U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical protein B0353.1 protein. Length = 182 Score = 28.3 bits (60), Expect = 7.2 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 234 LPKYDNCGWPGQTRQTLPGLNPARSYAPIGRATWS-PRLAPARSPPWGTTSPPRITRRPC 410 LP +D P T + + + S + +T S P APA PP TS P + P Sbjct: 83 LPDFDPSFVPVPTPRLSVPFSASMSTLELSSSTLSSPVTAPAPPPP--PTSKPTVEVHPM 140 Query: 411 PTD 419 PTD Sbjct: 141 PTD 143 >AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical protein C36B7.5b protein. Length = 1148 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +3 Query: 252 CGWPGQTRQTLPGLNPARSYAPIGRATWS 338 C PG T QT P L P+G+ WS Sbjct: 790 CHCPGDTFQTRPCLEQNACQDPVGKCEWS 818 >AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical protein C36B7.5a protein. Length = 1121 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +3 Query: 252 CGWPGQTRQTLPGLNPARSYAPIGRATWS 338 C PG T QT P L P+G+ WS Sbjct: 790 CHCPGDTFQTRPCLEQNACQDPVGKCEWS 818 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,288,112 Number of Sequences: 27780 Number of extensions: 452103 Number of successful extensions: 1475 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1268 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1461 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2077023564 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -