Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0943
         (797 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_1576| Best HMM Match : bZIP_1 (HMM E-Value=1.1e-11)                 29   4.4  
SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)              28   7.6  

>SB_1576| Best HMM Match : bZIP_1 (HMM E-Value=1.1e-11)
          Length = 382

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 486 VFVAERSDHKKHDNXEDKRQVRVRWSPPQGLTGEVVFRATIVKTL 620
           +F  + S    H N  DK  +R+   PP G+TG+  FR +  + L
Sbjct: 55  LFYEQNSHMVGHHNKYDKNSMRLNLRPP-GMTGQENFRPSASRNL 98


>SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)
          Length = 663

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 641 YSDPEDLQCLDDGGAEHDLPGETL 570
           Y+D ED++ +DD   +HD+P + L
Sbjct: 406 YNDEEDVKSVDDSFDKHDIPYDVL 429


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,216,193
Number of Sequences: 59808
Number of extensions: 461617
Number of successful extensions: 860
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)