Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0943
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z77659-2|CAB01165.1|  183|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 501 RSDHKKHDNXEDKRQVRVRWSPPQGLTGEVVFRATIVKTLKVFWVGVQSAPIKIVS*AAT 680
           R     H N + K  V + W  P+  +G VVFRA++++T  +++   +   +K+     T
Sbjct: 119 RQSGVSHANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVKLCIQKGT 178

Query: 681 SI 686
            I
Sbjct: 179 QI 180


>Z77659-2|CAB01165.1|  183|Caenorhabditis elegans Hypothetical
           protein F23B12.3 protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 519 HDNXEDKRQVRVRWSPPQGLTGEVVFRATIVKTLKVFWV-GVQSAPI 656
           H + E K+ +++ W     +   V F AT+VK    FWV  V+S P+
Sbjct: 92  HSHDEKKKHIKMWWKVDDEVD-TVQFVATVVKHQTQFWVKSVRSRPL 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,918,636
Number of Sequences: 27780
Number of extensions: 335353
Number of successful extensions: 601
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)