Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0943
         (797 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g39080.1 68415.m04802 expressed protein                             30   1.5  
At3g26950.1 68416.m03374 expressed protein                             28   8.3  

>At2g39080.1 68415.m04802 expressed protein 
          Length = 351

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -1

Query: 701 NYSGSYRRRCSGYNFNWSRLY-SDPEDLQCLDDGGAEHDLPGETLGRRP 558
           +Y+G  R   S +N   S L+ S      C D+G    D P   LG+ P
Sbjct: 161 DYAGEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSP 209


>At3g26950.1 68416.m03374 expressed protein 
          Length = 548

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +2

Query: 35  GWWXXLWENPPRVSTTTLALF-LPLK---AINAFRFEGWXS-RCNYTETLEL 175
           GWW  +W++P    T  LA F + L     +N  RF  + S +  Y  T+ +
Sbjct: 496 GWWDGIWQSPIPRDTRRLAAFGIELSGFGTVNEDRFHAYCSAKKEYVSTVTI 547


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,003
Number of Sequences: 28952
Number of extensions: 314370
Number of successful extensions: 602
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)