Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0942
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   3.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   7.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   7.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = -2

Query: 228 TGFFYSLKKVGPF*TESC*KQQAAHHD 148
           T  FY   K  PF    C K Q   H+
Sbjct: 12  TNSFYQNYKTNPFLASDCDKNQNTEHN 38


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 338 SALCGVIYVRYARILQQRVSDNAEPTCRL 252
           SA+C ++   +  +  Q++  N E  C+L
Sbjct: 3   SAVCVLVLAFFGCVRAQQLKGNQEDPCKL 31


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 530 KSPRQVYGGIPVLYEGPKSRNMNMRYKSAVL*GGLLYYPI 649
           K+P    G   V Y+ PKS  + ++Y  ++   G++ + I
Sbjct: 324 KTPYMYKGNQWVGYDNPKSIAIKVQYAKSLNLAGVMIWSI 363


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 366 FFYLYYIYT 340
           FFYL YIYT
Sbjct: 88  FFYLSYIYT 96


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 366 FFYLYYIYT 340
           FFYL YIYT
Sbjct: 44  FFYLSYIYT 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 438 NTFGTMCKDTTKLNKNC 488
           N F T+    TKL KNC
Sbjct: 550 NRFVTLNVQLTKLTKNC 566


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,271
Number of Sequences: 336
Number of extensions: 3855
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)