Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0942
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0398 - 17690979-17690998,17691034-17691446,17691709-176917...    30   2.7  
06_01_0648 + 4689755-4690693                                           29   4.6  

>07_03_0398 -
           17690979-17690998,17691034-17691446,17691709-17691764,
           17691922-17692054,17694244-17694403,17694862-17694955,
           17695791-17695928,17696017-17696174,17696729-17696810,
           17697055-17697151,17698703-17698824,17699833-17699910,
           17700437-17700565,17701301-17701531
          Length = 636

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 578 VPRIIRVFPHIPDEGI*HVIFLYLKFIMICAVL 480
           V R+  V PHIPDE I  V F +L  +++   L
Sbjct: 596 VDRVREVLPHIPDELIIEVHFYFLSTLVLAITL 628


>06_01_0648 + 4689755-4690693
          Length = 312

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 370 VIFLFILYLYIARYVGS 320
           V+F+F+LYLY  RY+G+
Sbjct: 34  VVFVFLLYLYAKRYLGA 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,424,442
Number of Sequences: 37544
Number of extensions: 334407
Number of successful extensions: 513
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)