Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0942
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    32   0.59 
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    32   0.59 

>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +3

Query: 477 NKNCTNHYKFQVKKYNVLNPLVRYMGEYPYYTRDRNRVI*ICVIRAPCY-KEDYCIIQYP 653
           N NC +  + Q K   VL  LV  + E  +Y R     I IC I +  Y +  Y +I   
Sbjct: 63  NGNCDDGIERQKKFLKVLRELVNLVAEKQWYAR-HGGAIAICQIASTSYDRLSYELIDTI 121

Query: 654 LH*ILYALPLXPFDVF 701
           L+ +++ L L  F+ F
Sbjct: 122 LYLLIHVLILDKFNDF 137


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +3

Query: 477 NKNCTNHYKFQVKKYNVLNPLVRYMGEYPYYTRDRNRVI*ICVIRAPCY-KEDYCIIQYP 653
           N NC +  + Q K   VL  LV  + E  +Y R     I IC I +  Y +  Y +I   
Sbjct: 63  NGNCDDGIERQKKFLKVLRELVNLVAEKQWYAR-HGGAIAICQIASTSYDRLSYELIDTI 121

Query: 654 LH*ILYALPLXPFDVF 701
           L+ +++ L L  F+ F
Sbjct: 122 LYLLIHVLILDKFNDF 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,635
Number of Sequences: 27780
Number of extensions: 332203
Number of successful extensions: 628
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)