Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0939
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 607 LKIQLFCNFIVEYFI*SNTLAVIVIMSNFD 696
           LK   +CNFI+ +++  +   ++V  ++ D
Sbjct: 316 LKTNKYCNFIILFYL--SVFVILVYYASLD 343


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 207 DHDNFCKKRHKFNF*KLN 260
           D   FCK   KF F K+N
Sbjct: 574 DASYFCKLPEKFRFVKIN 591


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 78  LLANARISKESYFFFLIKRTQVL 146
           LLAN ++     FF+L+ + + L
Sbjct: 163 LLANYKVITSDEFFYLVSKIESL 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,657
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)