Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0938
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 111 6e-25
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 111 6e-25
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 110 1e-24
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 110 1e-24
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 101 6e-22
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 101 6e-22
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 31 1.0
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 31 1.0
Z36753-3|CAA85332.1| 297|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 4.1
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 4.1
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 111 bits (267), Expect = 6e-25
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +3
Query: 255 LFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRI 434
LF LHV G Y +F A W+T++F+ LY+ SG GITAGAHRLW+HKSYKA P+RI
Sbjct: 53 LFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTPMRI 112
Query: 435 LLTIFNTIAFQDAVVDWARDHRMH 506
L + N IA Q+ +++WARDHR H
Sbjct: 113 FLMLLNNIALQNDIIEWARDHRCH 136
Score = 93.5 bits (222), Expect = 2e-19
Identities = 38/66 (57%), Positives = 54/66 (81%)
Frame = +2
Query: 509 KYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQIL 688
K+++TDADPHN TRGFFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y L
Sbjct: 138 KWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPL 197
Query: 689 MPLAXF 706
+ L F
Sbjct: 198 VILFCF 203
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 111 bits (267), Expect = 6e-25
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +3
Query: 255 LFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRI 434
LF LHV G Y +F A W+T++F+ LY+ SG GITAGAHRLW+HKSYKA P+RI
Sbjct: 53 LFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTPMRI 112
Query: 435 LLTIFNTIAFQDAVVDWARDHRMH 506
L + N IA Q+ +++WARDHR H
Sbjct: 113 FLMLLNNIALQNDIIEWARDHRCH 136
Score = 93.5 bits (222), Expect = 2e-19
Identities = 38/66 (57%), Positives = 54/66 (81%)
Frame = +2
Query: 509 KYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQIL 688
K+++TDADPHN TRGFFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y L
Sbjct: 138 KWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPL 197
Query: 689 MPLAXF 706
+ L F
Sbjct: 198 VILFCF 203
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 110 bits (264), Expect = 1e-24
Identities = 48/84 (57%), Positives = 57/84 (67%)
Frame = +3
Query: 255 LFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRI 434
LF LH G Y +F+A W+T IF LY+ G GITAGAHRLW+HKSYKA P+RI
Sbjct: 54 LFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRI 113
Query: 435 LLTIFNTIAFQDAVVDWARDHRMH 506
L I N IA Q+ V++WARDHR H
Sbjct: 114 FLMILNNIALQNDVIEWARDHRCH 137
Score = 95.5 bits (227), Expect = 4e-20
Identities = 38/66 (57%), Positives = 55/66 (83%)
Frame = +2
Query: 509 KYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQIL 688
K+++TDADPHN TRGFFF+H+GWLL+RKHP++K +G +D++DL +DP+L FQ+K+Y L
Sbjct: 139 KWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPL 198
Query: 689 MPLAXF 706
+ L F
Sbjct: 199 VILCCF 204
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 110 bits (264), Expect = 1e-24
Identities = 48/84 (57%), Positives = 57/84 (67%)
Frame = +3
Query: 255 LFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRI 434
LF LH G Y +F+A W+T IF LY+ G GITAGAHRLW+HKSYKA P+RI
Sbjct: 54 LFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRI 113
Query: 435 LLTIFNTIAFQDAVVDWARDHRMH 506
L I N IA Q+ V++WARDHR H
Sbjct: 114 FLMILNNIALQNDVIEWARDHRCH 137
Score = 95.5 bits (227), Expect = 4e-20
Identities = 38/66 (57%), Positives = 55/66 (83%)
Frame = +2
Query: 509 KYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQIL 688
K+++TDADPHN TRGFFF+H+GWLL+RKHP++K +G +D++DL +DP+L FQ+K+Y L
Sbjct: 139 KWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPL 198
Query: 689 MPLAXF 706
+ L F
Sbjct: 199 VILCCF 204
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 101 bits (242), Expect = 6e-22
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 255 LFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRI 434
LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++YKA L R+
Sbjct: 45 LFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRV 104
Query: 435 LLTIFNTIAFQDAVVDWARDHRMH 506
L + N+IAFQ+ ++DWARDHR H
Sbjct: 105 FLMLINSIAFQNDIIDWARDHRCH 128
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +2
Query: 509 KYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQIL 688
K+++TDADPH+ RG FF+H+GWLL++KH ++K +G +D++DL DP+L FQ+K Y L
Sbjct: 130 KWTDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPL 189
Query: 689 MPLAXFH-HAYICTNIVGEKQF 751
+ + F +I + GE F
Sbjct: 190 VGIFCFALPTFIPVVLWGESAF 211
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 101 bits (242), Expect = 6e-22
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 255 LFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRI 434
LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++YKA L R+
Sbjct: 45 LFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRV 104
Query: 435 LLTIFNTIAFQDAVVDWARDHRMH 506
L + N+IAFQ+ ++DWARDHR H
Sbjct: 105 FLMLINSIAFQNDIIDWARDHRCH 128
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +2
Query: 509 KYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQIL 688
K+++TDADPH+ RG FF+H+GWLL++KH ++K +G +D++DL DP+L FQ+K Y L
Sbjct: 130 KWTDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPL 189
Query: 689 MPLAXFH-HAYICTNIVGEKQF 751
+ + F +I + GE F
Sbjct: 190 VGIFCFALPTFIPVVLWGESAF 211
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 118 MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRPWKIVWRNVICS 261
+PP +A + + +P +PPH PPS E P ++IC+
Sbjct: 66 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYPEVYYPPHIICN 113
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 118 MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRPWKIVWRNVICS 261
+PP +A + + +P +PPH PPS E P ++IC+
Sbjct: 72 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYPEVYYPPHIICN 119
>Z36753-3|CAA85332.1| 297|Caenorhabditis elegans Hypothetical
protein T09A5.4 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -1
Query: 265 IKNRSHFSTQSSKVSSLLREVHGAVHLLAGYWRRLRTIPTKPPVSFGEAFSLKQCTDYN* 86
++NRS T+ + L+ GA H L W+R +P + +S A + D
Sbjct: 62 VENRSTDKTRKPEYGKLIFYYQGAAHALVSIWKRDSDLPFEQYISGDIARLFNKALDV-- 119
Query: 85 FN*ALKHTEP 56
A++H +P
Sbjct: 120 ---AIRHMDP 126
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 395 PKSVRASCYTQSRTQVQKYGEYRSPPHGFEKEQVPSINTTDMQNKE 258
PK + + Y R+Q ++ GE +PP + +PS D+ N E
Sbjct: 1530 PKKITFAEYNSRRSQKREAGECSTPPAVTRRGFIPSTEGEDLVNVE 1575
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 395 PKSVRASCYTQSRTQVQKYGEYRSPPHGFEKEQVPSINTTDMQNKE 258
PK + + Y R+Q ++ GE +PP + +PS D+ N E
Sbjct: 1509 PKKITFAEYNSRRSQKREAGECSTPPAVTRRGFIPSTEGEDLVNVE 1554
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,767,805
Number of Sequences: 27780
Number of extensions: 531121
Number of successful extensions: 1517
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -