Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0937
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 639 RLEHFPLRITRHYIFLRFFV*ESKI 565
           +L+ FPL   RH I  + F  ES +
Sbjct: 471 KLQSFPLLSQRHQIDAKMFCNESSV 495


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 753 ENLGYSLAVGTITIRRFVLHVGVLEI 676
           E + +  + G + I+RF+  +G LE+
Sbjct: 318 ERIYFYWSFGFLIIQRFIHQIGTLEV 343


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 732 PVSTPSSPSGYYKW 773
           P+ST S PS +Y++
Sbjct: 211 PISTSSLPSDFYRF 224


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 732 PVSTPSSPSGYYKW 773
           P+ST S PS +Y++
Sbjct: 103 PISTSSLPSDFYRF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,747
Number of Sequences: 336
Number of extensions: 4720
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)