Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0937
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    27   0.28 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   2.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   2.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.5  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 28  FCIYYLLSDTI-TYAKILNNCVINMIQYSHL*EQLR 132
           FC  ++  D + + A ILN C I++ +Y H+ + LR
Sbjct: 97  FCDTWIAFDVMCSTASILNLCAISLDRYIHIKDPLR 132


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -1

Query: 806 ESVSHHWIWNPPFIISRXRTWGTHWL 729
           E  ++++IW+P  I++  R   T+W+
Sbjct: 140 EPYNNYYIWHPGKIVNGKRVPPTNWV 165


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 748 LGVLTGCRYHYDTKICAACWSAGDLKY 668
           L +L+GC Y++ T I    ++   +KY
Sbjct: 309 LYILSGCLYYFSTTINPILYNLMSIKY 335


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -1

Query: 806 ESVSHHWIWNPPFIISRXRTWGTHWL 729
           E  ++++IW+P  I++  R   T+W+
Sbjct: 140 EPYNNYYIWHPGKIVNGKRVPPTNWV 165


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 228 PSDASSCSCNIDLQTCR*QHD--FIIVC 305
           PS ASSCSC +D    R   D  F+ VC
Sbjct: 320 PSQASSCSC-LDCDEIRESLDTQFLQVC 346


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 739 LTGCRYHYDTKICAACWSAGDLKY 668
           LTGC Y++ T I    ++    KY
Sbjct: 300 LTGCLYYFSTTINPILYNVMSAKY 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,445
Number of Sequences: 438
Number of extensions: 5586
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)