Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0936
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical pr...    63   3e-10
U23484-10|AAC46772.1|  197|Caenorhabditis elegans Hypothetical p...    42   4e-04
U23484-11|AAC46764.2|  191|Caenorhabditis elegans Hypothetical p...    42   6e-04
AF038623-4|AAO91699.1|  177|Caenorhabditis elegans Hypothetical ...    35   0.066
Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical
           protein C17E4.5 protein.
          Length = 205

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +1

Query: 514 GXVDYGXTAEELEQHFHGCGSIXRVTVLCNKL*WPPKRFCLPSEFGDQGIVSRTAM 681
           G VDYG TAEE+EQHFHGCGS+ RVT+ C++    PK F        +G+ +  AM
Sbjct: 83  GNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAM 138


>U23484-10|AAC46772.1|  197|Caenorhabditis elegans Hypothetical
           protein EEED8.12 protein.
          Length = 197

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 22/59 (37%), Positives = 29/59 (49%)
 Frame = +1

Query: 514 GXVDYGXTAEELEQHFHGCGSIXRVTVLCNKL*WPPKRFCLPSEFGDQGIVSRTAMGXG 690
           G VD+  T EE+E+HF GCG I R T+  +K     K F    EF D   +    +  G
Sbjct: 66  GNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAY-IEFDDSSSIENALVMNG 123


>U23484-11|AAC46764.2|  191|Caenorhabditis elegans Hypothetical
           protein EEED8.4 protein.
          Length = 191

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = +1

Query: 514 GXVDYGXTAEELEQHFHGCGSIXRVTVLCNKL*WPPKRFCLPSEFGDQGIVSRTAMGXG 690
           G VD+  T EE+E+HF GCG I + T+  +K     K F    EF D   +    +  G
Sbjct: 60  GNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAY-IEFDDSSSIENALVMNG 117


>AF038623-4|AAO91699.1|  177|Caenorhabditis elegans Hypothetical
           protein T08B6.5 protein.
          Length = 177

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 514 GXVDYGXTAEELEQHFHGCGSIXRVTVLCNKL*WPPKRF 630
           G VD+  T  E+E+HF  CG + RVT+  +K     K F
Sbjct: 51  GNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNF 89


>Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical
           protein R09B3.2 protein.
          Length = 83

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 514 GXVDYGXTAEELEQHFHGCGSIXRVTVLCNKL*WPPKRFCLPSEFGDQGIVSR 672
           G   +  T EEL   F   G I  V ++C++    P+ F    EF ++G   R
Sbjct: 10  GNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAF-IEFAEEGSAQR 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,957,095
Number of Sequences: 27780
Number of extensions: 192284
Number of successful extensions: 379
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)