Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0933
(643 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 44 1e-04
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 40 0.001
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 34 0.070
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 34 0.092
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 34 0.092
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 34 0.092
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 34 0.092
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 32 0.28
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 31 0.49
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 31 0.49
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 31 0.86
At1g68790.1 68414.m07863 expressed protein 31 0.86
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 1.1
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 30 1.5
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 30 1.5
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 1.5
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 29 2.0
At5g55140.1 68418.m06875 ribosomal protein L30 family protein co... 29 2.0
At3g50370.1 68416.m05508 expressed protein 29 2.0
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 29 2.0
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 29 2.0
At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966, gb|R6... 29 2.0
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 29 2.6
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 29 2.6
At2g35070.1 68415.m04302 expressed protein 29 2.6
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 2.6
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 29 2.6
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 29 2.6
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 29 3.5
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 29 3.5
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 3.5
At5g39450.1 68418.m04778 F-box family protein contains Pfam:PF00... 28 4.6
At3g58840.1 68416.m06558 expressed protein 28 4.6
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 4.6
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 28 4.6
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 4.6
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 4.6
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 28 4.6
At5g61920.1 68418.m07773 hypothetical protein 28 6.1
At5g40450.1 68418.m04905 expressed protein 28 6.1
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 6.1
At4g24760.1 68417.m03545 expressed protein 28 6.1
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 28 6.1
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 28 6.1
At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containi... 28 6.1
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 6.1
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 6.1
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 28 6.1
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 28 6.1
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 27 8.0
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 8.0
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 27 8.0
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 180 LAHQ--VKGRTGLQQGLEGRLRVRAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERT 353
L HQ V R GL QG R + + F+K ++G D+N + ++ +++ ++
Sbjct: 21 LVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGE-ADSNPEFQKTVKEFKER---- 75
Query: 354 AEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 491
AEEL+ D++ EKL Q E++ +AKKVSS+V++
Sbjct: 76 AEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKD 121
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 276 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 455
L G +A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q+++
Sbjct: 278 LSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTR 337
Query: 456 KLAKKVSSNVQETNEKLA 509
+ + + +ET + A
Sbjct: 338 ESTESGAQKAEETKDSAA 355
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 34.3 bits (75), Expect = 0.070
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 455
Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q
Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77
Query: 456 KLAKKVSSNVQETNEK 503
+K S Q +K
Sbjct: 78 SAKEKTSQTAQTAQQK 93
Score = 31.5 bits (68), Expect = 0.49
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +3
Query: 291 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 467
G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 468 KVSSNVQETNEK 503
K Q EK
Sbjct: 71 KAHETAQSAKEK 82
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 33.9 bits (74), Expect = 0.092
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 443
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 444 QESQKLAKKVSSN-VQETNEK 503
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 33.9 bits (74), Expect = 0.092
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 443
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763
Query: 444 QESQKLAKKVSSN-VQETNEK 503
E +LAK+ +N V T +K
Sbjct: 764 GEKVQLAKEEGANDVLSTPDK 784
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.092
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 443
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 444 QESQKLAKKVSSN-VQETNEK 503
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.092
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 443
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 444 QESQKLAKKVSSN-VQETNEK 503
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 32.3 bits (70), Expect = 0.28
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 315 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 485
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 486 QE 491
E
Sbjct: 1057 SE 1058
>At2g20510.1 68415.m02395 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 472
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +3
Query: 243 RAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 422
R + F+K+++G + E++ + ++ EE + D++ EKL
Sbjct: 44 RFSVFTEFSKNIRG-----EAHSNPEFERTVKELKERTEEFKGVTEDLKVRTKQTTEKLY 98
Query: 423 AAVQNTVQESQKLAKKVSSNVQE 491
E++ AKKVSS+V++
Sbjct: 99 KQADGVWTEAESAAKKVSSSVKD 121
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 31.5 bits (68), Expect = 0.49
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 228 GRLRVRAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 407
G L+V+A + AK+ Q ++ N K + E+ + I R AEE + +++ A
Sbjct: 529 GILQVKAE--DKVAKTSQ-SITITNDKGRLTEEEIEEMI-REAEEFAEEDKIMKEKIDA- 583
Query: 408 REKLQAAVQN---TVQESQKLAKKVSSNVQETNE 500
R KL+ V N TV + +KLAKK+S +E E
Sbjct: 584 RNKLETYVYNMKSTVADKEKLAKKISDEDKEKME 617
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +3
Query: 246 AATLNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATA 404
A TL A L+ + + K K+ L++ + I++ E + + D+E+ N++A
Sbjct: 722 ADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSA 781
Query: 405 LREKLQAAVQNTVQESQKLAKKVS 476
+ E+L A QN+ E+ K ++K S
Sbjct: 782 VSEQLPIARQNSAFENDKFSEKRS 805
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 30.7 bits (66), Expect = 0.86
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 222 LEGRLRVRAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNAT 401
L+ R R L +SL L GK E +EQ + I E+L K +EK
Sbjct: 360 LDSRRREFEMELEQMRRSLDEEL---EGKKAE-IEQLQVEISHKEEKLAKREAALEKKEE 415
Query: 402 ALREK---LQAAVQNTVQESQKLAKKVSSNVQETNEKL 506
+++K L A ++ TV+E +K K + NE+L
Sbjct: 416 GVKKKEKDLDARLK-TVKEKEKALKAEEKKLHMENERL 452
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 294 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 464
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 465 KKVSSNVQETNE 500
S VQE E
Sbjct: 703 ----STVQEAEE 710
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 336 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 467
+++E+ +E RKAH + A AL +LQAA + Q+LA+
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 330 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 482
S N+ RT ++ HP+ + + +RE + + ++E+ +L + V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 306 KAKEALEQSRQNIERTAEEL-RKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 482
KA +A E+ R+ E + +KAH E+ +REK Q + +S+ ++V +
Sbjct: 233 KAHDAKEKVREKAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKSKNAWERVKNG 292
Query: 483 VQE 491
+E
Sbjct: 293 ARE 295
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 222 LEGRLRV--RAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 392
L GR+ V R+ T N + +L+ +NG K L+ S N E ++ +AH +E+
Sbjct: 265 LSGRITVPSRSTTSNGYHSNLEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEE 323
>At5g55140.1 68418.m06875 ribosomal protein L30 family protein
contains similarity to 50S ribosomal protein L30
Length = 109
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 210 LQQGLEGRLRVRAATLNAFA--KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD 383
L +GL G ++ TL A + + L N + ++Q ++ + EE+ A +
Sbjct: 23 LVRGLPGTRKLHRRTLEAMGLRRCHRTVLHSNNSSIRGMIDQVKRMVVVETEEMYNARKE 82
Query: 384 VEKNATALREKLQAAVQNTVQESQKLA 464
E N ALR L + + +S ++
Sbjct: 83 AEANHKALRPPLVVSHSSPATDSSNMS 109
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 470
EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 276 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 455
L G++ ++ +KE E SR + R ++EK +RE++QA + +E++
Sbjct: 28 LSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERVQAQLGRVEEETK 83
Query: 456 KLA 464
+LA
Sbjct: 84 RLA 86
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 279 QGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ---AAVQNTVQE 449
Q AL + + +AL + ER AEE R AH + A +L+ +
Sbjct: 369 QAALNEGKLSSLQALREELATTERRAEEERSAHNATKMAAMERERELEHRAVDASTALVR 428
Query: 450 SQKLAKKVSSNVQETNEKLA 509
Q++A + ++ V + +K+A
Sbjct: 429 IQRIADERTAKVADFEQKVA 448
>At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966,
gb|R65511, gb|T42324 and gb|T20569 come from this gene
Length = 571
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 222 LEGRLRVRAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 398
+ G L +R A K+ + D A +AL + N+E+ +E + + E+N+
Sbjct: 397 MRGSLEIRLAAALELKKTAEKEKKDKEDSALKALAEQEANMEKVVQESKLLQQEAEENS 455
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 306 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 485
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 486 QETNEKL 506
+ E L
Sbjct: 246 EFNQEPL 252
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 306 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 485
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 486 QETNEKL 506
+ E L
Sbjct: 246 EFNQEPL 252
>At2g35070.1 68415.m04302 expressed protein
Length = 158
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 201 RTGLQQGLEGRLRVRAATLNAFAKSLQGALGDANGKAKEALEQSRQ-NIERTAEELRKAH 377
+ G+ + LE + V + A ++ GK K + +S + R AEE RK
Sbjct: 30 KLGMVKALEA-INVPSTQAEALTGAITSGFESVMGKVKADIAKSEEYKSTRVAEEFRKMR 88
Query: 378 PDVEK 392
D+EK
Sbjct: 89 ADIEK 93
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/67 (22%), Positives = 37/67 (55%)
Frame = +3
Query: 309 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 488
AKE +E+ R +E + + + + N TAL++ +++A +N E++K + + + +
Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028
Query: 489 ETNEKLA 509
E+++
Sbjct: 1029 SLRERVS 1035
>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeodomain leucine zipper protein GI:5006851 from
[Oryza sativa]
Length = 206
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 547 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 642
H D + GGR+R+ + + E SHL+ SFI
Sbjct: 55 HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 29.1 bits (62), Expect = 2.6
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +3
Query: 204 TGLQQGLEGRLRVRAATLNAFAK---SLQGALGDANGKAKEALEQSRQNIERTAEELRKA 374
TG+ + L GRL++ +LN A+ L+ L D + EA + Q +E T E
Sbjct: 248 TGISKELVGRLQILQFSLNGSAQRESELKSKLEDCTVQL-EAKDLLVQKLEGTISE---- 302
Query: 375 HPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLA 509
+ ++ LRE +++A Q +L K V+++ QE LA
Sbjct: 303 NSEIVSEVLTLREYVKSAEQKLKNTDLEL-KSVNASKQEILVHLA 346
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +3
Query: 297 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 476
A KA + E+++ E T E++ + A ++EK + + T + + A + +
Sbjct: 173 AKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAA 232
Query: 477 SNVQETNEK 503
+ET +K
Sbjct: 233 DKAEETKDK 241
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +3
Query: 297 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 476
A KA + E+++ E T E++ + A ++EK + + T + + A + +
Sbjct: 137 AKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAA 196
Query: 477 SNVQETNEK 503
+ET +K
Sbjct: 197 DKAEETKDK 205
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +3
Query: 255 LNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNATALRE 413
LN L+G L ++KE LEQ+ R N ++ EELR+ ++E + +
Sbjct: 428 LNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKLKSRED 487
Query: 414 ---KLQAAVQNTVQESQKLAKKVSSNVQETNE 500
+ VQ+T+ E L+K++ + Q+ +
Sbjct: 488 GSSHAEPTVQSTISEKHVLSKELDARKQQLED 519
>At5g39450.1 68418.m04778 F-box family protein contains Pfam:PF00646
F-box domain ; similar to SKP1 interacting partner 2
(SKIP2) TIGR_Ath1:At5g67250
Length = 579
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 205 QDFSKAWKDGSESVLQHSTPSPRVSRERSETRTARPRRLWN 327
+ FS+ ++ G + +L S+ S +S RSETR ++ N
Sbjct: 321 KSFSRYFRSGIKHILGRSSSSKNMSSSRSETRPLNLQKFLN 361
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 306 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 479
KA + + + E+ AE LRK +VEK L K+ V+E ++ +KK+ S
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKSKKLRS 182
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 318 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETN 497
ALE ++ E + D+ K T+ EKLQ+ + + +E+ ++ S +E
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 498 EKLA 509
+A
Sbjct: 536 SVIA 539
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 267 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 446
AKSL + KAKE EQ++ L A ++E A E+L A ++
Sbjct: 563 AKSLAEVAREELRKAKEEAEQAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALE 620
Query: 447 ESQKLAK 467
ES+ K
Sbjct: 621 ESESTLK 627
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 115 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 231
D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 267 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 446
AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569
Query: 447 ESQ 455
E++
Sbjct: 570 ETE 572
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 222 LEGRLRVRAA-TLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 398
+E L+++ + +K L+ L + + L+ ++ER + + +VEKN
Sbjct: 402 VENMLKIKEEFDYKSLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNF 461
Query: 399 TALREKLQAAVQNTVQES-QKLAKKVSSN 482
EK + Q ES +KL +K+ SN
Sbjct: 462 AEALEKEKLKCQMEYMESVKKLEEKLISN 490
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 315 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ--AAVQNTVQESQKLAKKVSSNVQ 488
E+LE S Q +ER EE ++ + E+ + EKL ++ + + K +K+ S +
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229
Query: 489 ETNEK 503
K
Sbjct: 230 TARNK 234
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +3
Query: 294 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 473
D+NG E ++Q NI EE+ A P + ++ + + +++ + S++ +K V
Sbjct: 824 DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880
Query: 474 SSNVQETNEK 503
++E E+
Sbjct: 881 DEKIEEKPEE 890
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 372 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 268
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At4g24760.1 68417.m03545 expressed protein
Length = 365
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 115 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQHSTPSPRVSRERSE 294
+ F + H K+F +E+ + SK FS+ +G E +HS +PR S++ E
Sbjct: 245 ELFPEYIGHLKKFVSAVEK-----SASKRNSSFSRRSMEGCEQPPRHSVDAPRKSKDGRE 299
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +3
Query: 297 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 476
A A A E+++ ERT +++ + A +EK + ++T+ +++ A+
Sbjct: 114 AKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAK 173
Query: 477 SNVQETNE 500
V+E E
Sbjct: 174 EKVKEYGE 181
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +3
Query: 189 QVKGRTGLQQGLEGRLRVRAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELR 368
++KG Q+ L+ + + + N + + + + KE LEQ + + EL
Sbjct: 266 EMKGLYTRQEMLQMKKDMEKSFENQQLRQMMERVETELRETKERLEQQLKEEKSARLELE 325
Query: 369 KAHPDVEKNATALREKL---QAAVQNTVQESQKLAKKVSSNVQETNEKLA 509
K +VEK ++ + ++L QA + +++ K+ + V+ N++LA
Sbjct: 326 KRAKEVEKRSSDVVKELNDEQAKRLESESRAKEAVKQSNGVVENLNKELA 375
>At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 850
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 311 GLAVRVSERSLETLGEGVECCSTDSEPSFQALLKSCASFDLVSE 180
G A+RV E + + EGV+ +E ++ A+L +C+ LVSE
Sbjct: 554 GFAIRVLETFNQMIEEGVK----PNEVTYVAILSACSHVGLVSE 593
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 303 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 464
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 303 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 464
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 345 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 506
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 345 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 506
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 294 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 473
D + K KE E+ R+ +ER E R+ +E+ REK++ + ++ KL K+
Sbjct: 137 DRHEKQKER-EREREKLEREKEREREK---IEREKEREREKMEREIFEREKDRLKLEKER 192
Query: 474 SSNVQETNEKL 506
+ EK+
Sbjct: 193 EIEREREREKI 203
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 345 RCSASTVPKPPWPCRSRLRALPGDSW 268
RC+ + P PP PC+S ++ P W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/89 (16%), Positives = 37/89 (41%)
Frame = +3
Query: 243 RAATLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 422
R + + K++QG GK+ + E +R+ + +E+ + + +K +
Sbjct: 51 RPGLIGSVMKAVQGTKDAVIGKSHDTAESTREGADIASEKAAGMRDTTGEVRDSTAQKTK 110
Query: 423 AAVQNTVQESQKLAKKVSSNVQETNEKLA 509
T ++++ K + +ET + A
Sbjct: 111 ETADYTADKAREAKDKTADKTKETADYAA 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,989,192
Number of Sequences: 28952
Number of extensions: 197930
Number of successful extensions: 1084
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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