Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0932
         (868 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CFABC Cluster: hypothetical protein TTHERM_0047...    35   3.1  
UniRef50_Q5JEC5 Cluster: Hypothetical membrane protein, conserve...    34   4.1  
UniRef50_O44740 Cluster: Meiotic spindle formation protein 2; n=...    34   5.4  
UniRef50_Q94HN4 Cluster: Putative uncharacterized protein OSJNBa...    33   7.1  
UniRef50_Q7QAR2 Cluster: ENSANGP00000011359; n=3; Culicidae|Rep:...    33   7.1  
UniRef50_Q7Z8P4 Cluster: Peptide synthetase; n=2; Emericella nid...    33   7.1  
UniRef50_A6M0E4 Cluster: CHAP domain containing protein precurso...    33   9.4  
UniRef50_A5JZ68 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  
UniRef50_Q6BVD1 Cluster: Similar to CA3886|IPF12963 Candida albi...    33   9.4  

>UniRef50_UPI00006CFABC Cluster: hypothetical protein
           TTHERM_00470600; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00470600 - Tetrahymena
           thermophila SB210
          Length = 903

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 FSILRSTQQITGQNLSSTCLEKIKRQHPNIDKLSHDQLKYTI-QILNKFNITPLEACE 405
           F+  ++  QI+G+N ++   EKI+ Q+ ++  +   +LK  + QILN+  I P+E  E
Sbjct: 359 FTTTQNLNQISGENFNNQINEKIELQNRDVPFVIEQELKQQVNQILNQNLIQPIEQQE 416


>UniRef50_Q5JEC5 Cluster: Hypothetical membrane protein, conserved;
           n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
           membrane protein, conserved - Pyrococcus kodakaraensis
           (Thermococcus kodakaraensis)
          Length = 425

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 642 SFYRFNHIYFTRFVCAVXGKPIWNXGLXHWKLD 740
           S Y F+H + + +  ++ G+P+WN  L HW  D
Sbjct: 205 SGYSFSHQFGSLYAFSLDGRPLWNITLGHWVRD 237


>UniRef50_O44740 Cluster: Meiotic spindle formation protein 2; n=1;
           Caenorhabditis elegans|Rep: Meiotic spindle formation
           protein 2 - Caenorhabditis elegans
          Length = 280

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 298 KIKRQHPNIDK-LSHD-QLKYT-IQILNKFNITPLEACENAHIFCMNSITMDNYGE 456
           K+K    N+++ LS+D QL  T I+ILN  N   L +C     F M +IT DNYG+
Sbjct: 139 KMKSFTSNMEQILSNDNQLAPTVIRILNSRNSWCLNSCHACLTFIMENITSDNYGK 194


>UniRef50_Q94HN4 Cluster: Putative uncharacterized protein
           OSJNBa0089D15.14; n=1; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0089D15.14 - Oryza sativa
           (Rice)
          Length = 80

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 307 RQHPNIDKLSHDQLKYTIQILNKFNITPLEACENA-HIFCMN 429
           R HPN D   HD  +   Q   +F   PL+  ++  H+ C+N
Sbjct: 5   RTHPNSDTYQHDSQESCTQAAARFGFLPLDQMQSKWHVICIN 46


>UniRef50_Q7QAR2 Cluster: ENSANGP00000011359; n=3; Culicidae|Rep:
           ENSANGP00000011359 - Anopheles gambiae str. PEST
          Length = 497

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 26/98 (26%), Positives = 40/98 (40%)
 Frame = +1

Query: 313 HPNIDKLSHDQLKYTIQILNKFNITPLEACENAHIFCMNSITMDNYGEILRECQXXXXXX 492
           +P + +L  ++    +  L    ITP E  E  H+   + IT++N   ILREC       
Sbjct: 20  NPALLELDREETIRKLSYLKYVYITPDEILEQPHVLFNHLITLENRTTILRECGLVEGLT 79

Query: 493 XXXXXXXXXXDPGQSPN*KRDGLIQADLNLEKGLPRLF 606
                             KR+ LI  DL++ + L R F
Sbjct: 80  LNAIGNYLKLIRKSIVMLKRNYLIPKDLDMYEQLKRQF 117


>UniRef50_Q7Z8P4 Cluster: Peptide synthetase; n=2; Emericella
            nidulans|Rep: Peptide synthetase - Emericella nidulans
            (Aspergillus nidulans)
          Length = 4793

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 456  NFKRMSIHQNYNQTHYXIHTLV--RSRT-IAKLKKGWFD 563
            +F R S  Q+Y +  Y  HT++    RT I KLKK WFD
Sbjct: 989  SFLRSSAEQSYEKPTYIYHTVLPLEPRTNIEKLKKAWFD 1027


>UniRef50_A6M0E4 Cluster: CHAP domain containing protein precursor;
           n=1; Clostridium beijerinckii NCIMB 8052|Rep: CHAP
           domain containing protein precursor - Clostridium
           beijerinckii NCIMB 8052
          Length = 311

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -3

Query: 785 GLEXPGNFTGN---FWNXVQFPMXQSPIPNRFSXYGTYEPGKIDVVESV 648
           G++    F GN   +WN   +P  Q+P  N  + +G    G +  +ESV
Sbjct: 67  GIKLNSQFYGNAKQWWNETTYPKGQTPAANSIAVFGNGSAGHVVFIESV 115


>UniRef50_A5JZ68 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1246

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 238 SILRSTQQITGQNLSSTCLEKIKRQHPNIDKLSHDQLKYTIQILNKFN 381
           S + + + IT      TCL+ + R H NID  S++ LKY  + +N  N
Sbjct: 268 SEINNLRNITNDETYCTCLDNLLRNHGNID--SNEMLKYNDKNINCLN 313


>UniRef50_Q6BVD1 Cluster: Similar to CA3886|IPF12963 Candida
           albicans; n=1; Debaryomyces hansenii|Rep: Similar to
           CA3886|IPF12963 Candida albicans - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 788

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 232 QFSILRSTQQITGQNLSSTCLEKIKRQHPNIDKLSHDQLKYTIQILNKFN 381
           Q +I R   QI  +NL + C EKIK  H  I  +  +++   I ++NK +
Sbjct: 410 QKAIKRKGSQILYKNLINRCKEKIKIGHELIQSIEANKMDNAIDLINKLS 459


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,706,981
Number of Sequences: 1657284
Number of extensions: 17031136
Number of successful extensions: 32964
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32960
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)