Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0932
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0005 - 4065845-4065970,4067856-4067913,4067982-4068040           33   0.22 
07_03_1166 - 24461881-24462013,24462255-24462643,24462877-244629...    30   2.8  
05_04_0066 + 17621532-17621619,17621658-17621820,17621864-176222...    29   6.4  
02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750...    29   6.4  
10_03_0002 - 6858257-6861205                                           28   8.4  

>10_02_0005 - 4065845-4065970,4067856-4067913,4067982-4068040
          Length = 80

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 307 RQHPNIDKLSHDQLKYTIQILNKFNITPLEACENA-HIFCMN 429
           R HPN D   HD  +   Q   +F   PL+  ++  H+ C+N
Sbjct: 5   RTHPNSDTYQHDSQESCTQAAARFGFLPLDQMQSKWHVICIN 46


>07_03_1166 -
           24461881-24462013,24462255-24462643,24462877-24462948,
           24463718-24463887,24464232-24464362,24464744-24464860,
           24464969-24465351,24465582-24465764
          Length = 525

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 325 DKLSHDQLKYTIQILNKFNITPLEACENAHIFCMN 429
           D+ SH+ LK+   +L    +  +E   +AH+FCM+
Sbjct: 411 DEPSHNSLKFLQALLGSVPLVHVEDACDAHVFCMD 445



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 325 DKLSHDQLKYTIQILNKFNITPLEACENAHIFCMN 429
           D+L H+ LK+   +L    +  ++   +AH+FCM+
Sbjct: 118 DELCHNVLKFLQALLGSVPLVHIDDVCDAHVFCMD 152


>05_04_0066 +
           17621532-17621619,17621658-17621820,17621864-17622233,
           17622548-17623009
          Length = 360

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 194 TQSCPLGLINSLRKSPWPVFAVDRFF*FIKLVICVTDRQDILM 66
           T S  L   N+L   PW     D+F   ++L IC+ D  DIL+
Sbjct: 161 TFSKMLAFANALADKPW-TRPTDKFSGLMQLRICINDVSDILV 202


>02_02_0179 +
           7500647-7500779,7503021-7503222,7503356-7503427,
           7503655-7503726,7504212-7504283,7504711-7504782,
           7505045-7505116,7505209-7505280,7505688-7505759,
           7506215-7506292,7506670-7506729,7506810-7506848,
           7506949-7506998,7507110-7507480,7508467-7508662,
           7508856-7508936,7509694-7509848,7510302-7510512,
           7510648-7510882,7510995-7511145,7511813-7512181
          Length = 944

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +1

Query: 277 LSSTCLEKIKRQHP-NIDKLSHDQLKYTIQILNKFNITPLEACENAHIFCMNSITMDNYG 453
           L      K+  Q P N D++   QL+Y     N F   P   C+ A++  ++S +  N  
Sbjct: 279 LMDLSFNKLTGQIPQNFDRMVALQLQYLDVSFNNFTGNPPNECQQANVNMVSSFSSSN-D 337

Query: 454 EILREC 471
            +L+ C
Sbjct: 338 NLLQPC 343


>10_03_0002 - 6858257-6861205
          Length = 982

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 772 QVILPVIFGTPSSFQWXNPXFQIG-FPNTAHTNL 674
           Q+ LPV FGT  +F+  N  F++  F  T H  L
Sbjct: 839 QITLPVTFGTRENFRTENISFEVADFETTYHAIL 872


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,932,570
Number of Sequences: 37544
Number of extensions: 430912
Number of successful extensions: 765
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)