Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0932
         (868 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   3.9  
Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.      24   5.2  
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     24   5.2  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   9.1  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   9.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.1  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 587 RVYQDCFMTG--PESNKKIGIILQIQP 661
           RVYQDC  TG  P+  K+  ++L  +P
Sbjct: 476 RVYQDCLNTGTFPQQWKRQRLVLLPKP 502


>Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.
          Length = 111

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 637 WHHFTDSTTSILP 675
           W +FTD+ TSILP
Sbjct: 88  WTNFTDAFTSILP 100


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 637 WHHFTDSTTSILP 675
           W +FTD+ TSILP
Sbjct: 88  WTNFTDAFTSILP 100


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 637 WHHFTDSTTSILPGSYVPYXEN 702
           W+H T    +++ G +VPY ++
Sbjct: 92  WNHTTGLQKNMVAGHFVPYPDD 113


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 637 WHHFTDSTTSILPGSYVPYXEN 702
           W+H T    +++ G +VPY ++
Sbjct: 92  WNHTTGLQKNMVAGHFVPYPDD 113


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +2

Query: 605  FMTGPESNKKIGIILQIQPHLFYQVRMCRIXKTYLEXGIGPLETG 739
            F   PE     G +  +   LFY  R   + +  LE G+    TG
Sbjct: 941  FAPSPECPACTGSVESVAHVLFYCPRFAEVRRDLLEMGVDGSITG 985


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 901,495
Number of Sequences: 2352
Number of extensions: 18424
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)