Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0931
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    26   0.43 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.3  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 587 TTQLLSLSCPFLGWHG 634
           T QLLSL C F GW G
Sbjct: 2   TIQLLSLICKFGGWMG 17


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 730 FNEHFPSALPSLRSTXPS 677
           F   +PSALP   S+ PS
Sbjct: 202 FRSPYPSALPISTSSLPS 219


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 730 FNEHFPSALPSLRSTXPS 677
           F   +PSALP   S+ PS
Sbjct: 94  FRSPYPSALPISTSSLPS 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,541
Number of Sequences: 336
Number of extensions: 4498
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)