Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0930
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1434 - 33568258-33569415                                         29   4.5  
04_04_0026 - 22222743-22222836,22223510-22223652,22224654-222246...    28   7.8  

>04_04_1434 - 33568258-33569415
          Length = 385

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 548 DMDFYIFNDIIY**TTRVVYYINTIIIPKHDHAVR 652
           +M FY FN I+Y    R +Y +NTI + +   A++
Sbjct: 132 EMPFYWFNFIVYDDADRRMYCVNTIFVVRLARAIQ 166


>04_04_0026 -
           22222743-22222836,22223510-22223652,22224654-22224699,
           22224916-22225043,22225178-22225285
          Length = 172

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 667 DGGATFSFRANEKESSLVDPASSKCLAPKXKPHVPSGKPY*XDT 798
           DG A    +A+ K+++L+DP S K L  +    V   K Y  DT
Sbjct: 4   DGAAATPAKASPKKANLLDPHSIKHLLDETISDVVKSKGYAEDT 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,751,515
Number of Sequences: 37544
Number of extensions: 320064
Number of successful extensions: 557
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)