Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0929
(829 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 30 0.46
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 29 0.61
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 29 0.80
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 27 4.3
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.3
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 22 7.2
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 7.5
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 26 7.5
SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces pom... 25 9.9
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 29.9 bits (64), Expect = 0.46
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 310 PIKCNTNIRLQHVATKKNLHSHFFTSPLSGNQ-EVSCY 420
PI + +RL H T +NLH+H +PL+ EVS Y
Sbjct: 401 PILNGSVVRLIHPFTNRNLHTHKIPAPLNKRMYEVSGY 438
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 29.5 bits (63), Expect = 0.61
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 814 QLEKFQKVHSTNFIMDLINNYHNPYKSITWCYGTVLRYYN 695
++EKF + TNF+ N Y P +GT+L+ +N
Sbjct: 200 RIEKFSEFLETNFLKFFNNEYRKPNWKGMASFGTILQEFN 239
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 29.1 bits (62), Expect = 0.80
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = +1
Query: 256 NSHWLVRPMTGET----CKRGAPIKCNTNIRLQHVATKKNLHSHFFTSPLSGNQE 408
N++W++ P K P+K I+L HV T +L +H SP E
Sbjct: 388 NNYWMILPADHYDPPIEAKLNVPVKNMDYIKLHHVGTNTDLMTHDVASPYHPTNE 442
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 313 IKCNTNIRLQHVATKKNLHSHFFTSPLSGNQ---EVSCY 420
+K + +RL+HV T + LHSH +S N E S Y
Sbjct: 377 LKDGSVVRLRHVMTGRALHSHEHKPIVSNNDWQLEASAY 415
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 540 LQDTIQYQHV*FYWCISPPVVIVADHSPIV 451
L+D + Q ISP V++ ++HSP+V
Sbjct: 175 LKDLLSLQFQQALLAISPSVIVTSEHSPLV 204
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 117 FAASVFSLIIEMRNTTVTKVAIERIFVFSIFL 22
F ++VFS+I + N + + +FS+FL
Sbjct: 86 FISTVFSIIKFLLNRRKVSFLLSFLLLFSLFL 117
Score = 21.8 bits (44), Expect(2) = 7.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -2
Query: 147 NIDPHVTNSFFAASVFSLI 91
NI +++N+FF S+F +
Sbjct: 59 NISRNISNTFFKKSIFFFV 77
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 7.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2
Query: 122 EFVTCGSILKLINTDLKLRLHSHDV 196
E+ CG ++ +NT L++RL ++
Sbjct: 117 EYCPCGGLIDFLNTRLQVRLSEQEI 141
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 25.8 bits (54), Expect = 7.5
Identities = 20/91 (21%), Positives = 38/91 (41%)
Frame = -2
Query: 279 RANQPVTIVSSETSTAVTDCCPDPDPYFTSCE*SLNFKSVLMSFNIDPHVTNSFFAASVF 100
+ N+P+ ++TA+ P P F +N K V ++ ID S + VF
Sbjct: 107 KINEPLN--GQTSTTAIVQFAPPPKVPFWEPNGKINVKGVDLAVQIDITAHRSHISRQVF 164
Query: 99 SLIIEMRNTTVTKVAIERIFVFSIFLEQNNP 7
S R+ + K+ + + ++ E+ P
Sbjct: 165 SK-NSFRSDQLVKIPLSSFKLGQVYDERIVP 194
>SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/34 (29%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 643 SLFILE-NYYHISMLYIQSYNILKLYHSTM*YFY 741
+LF+L + + + + Y+ +++IL+L HS+ ++Y
Sbjct: 43 NLFLLNRDIWSLIINYLDAFDILRLMHSSRQFYY 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,422,621
Number of Sequences: 5004
Number of extensions: 70345
Number of successful extensions: 157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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