BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0929 (829 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF067219-14|AAC17034.1| 206|Caenorhabditis elegans Hypothetical... 79 3e-15 Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 32 0.44 U80030-4|AAG24162.2| 370|Caenorhabditis elegans Serpentine rece... 29 4.1 AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 5.4 AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.1 AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 28 7.1 AF016682-11|AAB66190.2| 270|Caenorhabditis elegans Hypothetical... 28 7.1 AF038622-4|AAB94150.1| 337|Caenorhabditis elegans Hypothetical ... 28 9.4 >AF067219-14|AAC17034.1| 206|Caenorhabditis elegans Hypothetical protein R12E2.13 protein. Length = 206 Score = 79.4 bits (187), Expect = 3e-15 Identities = 41/105 (39%), Positives = 51/105 (48%), Gaps = 1/105 (0%) Frame = +1 Query: 256 NSHWLVRPMTGETCKRGAPIKCNTNIRLQHVATKKNLHSHFFTSPLS-GNQEVSCYXXXX 432 NSHW + P C RG IKC IRL+H+ T LHSH FT+PLS +QEVS + Sbjct: 69 NSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAF-GSE 127 Query: 433 XXXXXXXNWTVVCNNDYWRRDTPVKLDMLILDRILQAPGEHLVVP 567 +WTV+CN D W KL + L G+ P Sbjct: 128 AESDTGDDWTVICNGDEWLESEQFKLRHAVTGSYLSLSGQQFGRP 172 Score = 71.3 bits (167), Expect = 8e-13 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = +2 Query: 113 AKNEFVTCGSILKLINTDLKLRLHSHDVKYGSGSGQQSVTAVEVSDD 253 A +FVTC S+LK IN + RLHSHDVKYGSGSGQQSVTAV+ SDD Sbjct: 21 ADEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDD 67 Score = 53.2 bits (122), Expect = 2e-07 Identities = 24/49 (48%), Positives = 35/49 (71%) Frame = +3 Query: 504 KIRHVDTGSYLAGSGRTFGRPINGQGEIVGVSSQYGAYTDWQAS*GLFV 650 K+RH TGSYL+ SG+ FGRPI+GQ E+VG S G + W+ + G+++ Sbjct: 152 KLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSITGG-SAWKVAEGIYI 199 >Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein F29G6.3b protein. Length = 1785 Score = 32.3 bits (70), Expect = 0.44 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +1 Query: 460 TVVCNNDYW--RRDTPVKLDMLILDRILQAPGEHLVVPSMVKARLSE 594 T +NDYW RD D L D+I Q EH VPS+V A+ E Sbjct: 1402 TKKAHNDYWGFERDHHYVPDTLKKDKIKQIHREHNFVPSVVPAKPDE 1448 >U80030-4|AAG24162.2| 370|Caenorhabditis elegans Serpentine receptor, class w protein120 protein. Length = 370 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 354 CSYMLKSNVGVTFYRSTTLAGFSCHRANQPVTIVSSETSTA 232 C+++ + + YR TT+ FSC N TIVS + +T+ Sbjct: 323 CTHLFVCLIISSQYRKTTIYIFSCGLINSKQTIVSRKVTTS 363 >AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical protein F56E10.2 protein. Length = 813 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 300 LAGFSCHRANQPVTIVSSETSTAVTDCCPDP 208 LA FS RA +++ S+ S++ +D CP P Sbjct: 290 LADFSDGRAGSRISLASTSASSSPSDPCPSP 320 >AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical protein E02D9.1b protein. Length = 315 Score = 28.3 bits (60), Expect = 7.1 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +3 Query: 540 GSGRTFGRPINGQGEIVGVSSQYGAYTDWQAS*GLFVHPGELLPHQ 677 G G G P G G G Y Y + A+ G ++PG+ P Q Sbjct: 20 GGGHGGGYPQEGYGAAAGGYGGYDPYNPYGAAGGYGMYPGQGYPPQ 65 >AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical protein E02D9.1c protein. Length = 317 Score = 28.3 bits (60), Expect = 7.1 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +3 Query: 540 GSGRTFGRPINGQGEIVGVSSQYGAYTDWQAS*GLFVHPGELLPHQ 677 G G G P G G G Y Y + A+ G ++PG+ P Q Sbjct: 20 GGGHGGGYPQEGYGAAAGGYGGYDPYNPYGAAGGYGMYPGQGYPPQ 65 >AF016682-11|AAB66190.2| 270|Caenorhabditis elegans Hypothetical protein T07D3.1 protein. Length = 270 Score = 28.3 bits (60), Expect = 7.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 95 SEKTEAAKNEFVTCGSILKLINTDLKLRLHSHDVKYG 205 S+ TE +F+ G ++L N DLKL L + V G Sbjct: 55 SDDTEPTWEKFIEGGKSIQLCNNDLKLVLENRRVTLG 91 >AF038622-4|AAB94150.1| 337|Caenorhabditis elegans Hypothetical protein R07C12.1 protein. Length = 337 Score = 27.9 bits (59), Expect = 9.4 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = -3 Query: 728 MVLWYSFKIL*LCMYSMLMW**FSRMNKETLTCLPVSVSTIL*THSDNLALTI 570 M L + FKI+ + F ETL CLP TIL +S++L ++ Sbjct: 1 MKLKFKFKIISEIFQENFRFIFFKLYISETLECLPADPKTILFAYSNDLEASV 53 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,237,568 Number of Sequences: 27780 Number of extensions: 414980 Number of successful extensions: 1106 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1060 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1105 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2050970610 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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