Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0929
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-14|AAC17034.1|  206|Caenorhabditis elegans Hypothetical...    79   3e-15
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    32   0.44 
U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine rece...    29   4.1  
AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical ...    29   5.4  
AF106574-2|AAM81088.1|  315|Caenorhabditis elegans Hypothetical ...    28   7.1  
AF106574-1|AAY44015.1|  317|Caenorhabditis elegans Hypothetical ...    28   7.1  
AF016682-11|AAB66190.2|  270|Caenorhabditis elegans Hypothetical...    28   7.1  
AF038622-4|AAB94150.1|  337|Caenorhabditis elegans Hypothetical ...    28   9.4  

>AF067219-14|AAC17034.1|  206|Caenorhabditis elegans Hypothetical
           protein R12E2.13 protein.
          Length = 206

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 41/105 (39%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = +1

Query: 256 NSHWLVRPMTGETCKRGAPIKCNTNIRLQHVATKKNLHSHFFTSPLS-GNQEVSCYXXXX 432
           NSHW + P     C RG  IKC   IRL+H+ T   LHSH FT+PLS  +QEVS +    
Sbjct: 69  NSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAF-GSE 127

Query: 433 XXXXXXXNWTVVCNNDYWRRDTPVKLDMLILDRILQAPGEHLVVP 567
                  +WTV+CN D W      KL   +    L   G+    P
Sbjct: 128 AESDTGDDWTVICNGDEWLESEQFKLRHAVTGSYLSLSGQQFGRP 172



 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = +2

Query: 113 AKNEFVTCGSILKLINTDLKLRLHSHDVKYGSGSGQQSVTAVEVSDD 253
           A  +FVTC S+LK IN +   RLHSHDVKYGSGSGQQSVTAV+ SDD
Sbjct: 21  ADEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDD 67



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = +3

Query: 504 KIRHVDTGSYLAGSGRTFGRPINGQGEIVGVSSQYGAYTDWQAS*GLFV 650
           K+RH  TGSYL+ SG+ FGRPI+GQ E+VG  S  G  + W+ + G+++
Sbjct: 152 KLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSITGG-SAWKVAEGIYI 199


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 460  TVVCNNDYW--RRDTPVKLDMLILDRILQAPGEHLVVPSMVKARLSE 594
            T   +NDYW   RD     D L  D+I Q   EH  VPS+V A+  E
Sbjct: 1402 TKKAHNDYWGFERDHHYVPDTLKKDKIKQIHREHNFVPSVVPAKPDE 1448


>U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine
           receptor, class w protein120 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 354 CSYMLKSNVGVTFYRSTTLAGFSCHRANQPVTIVSSETSTA 232
           C+++    +  + YR TT+  FSC   N   TIVS + +T+
Sbjct: 323 CTHLFVCLIISSQYRKTTIYIFSCGLINSKQTIVSRKVTTS 363


>AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical
           protein F56E10.2 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 300 LAGFSCHRANQPVTIVSSETSTAVTDCCPDP 208
           LA FS  RA   +++ S+  S++ +D CP P
Sbjct: 290 LADFSDGRAGSRISLASTSASSSPSDPCPSP 320


>AF106574-2|AAM81088.1|  315|Caenorhabditis elegans Hypothetical
           protein E02D9.1b protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 540 GSGRTFGRPINGQGEIVGVSSQYGAYTDWQAS*GLFVHPGELLPHQ 677
           G G   G P  G G   G    Y  Y  + A+ G  ++PG+  P Q
Sbjct: 20  GGGHGGGYPQEGYGAAAGGYGGYDPYNPYGAAGGYGMYPGQGYPPQ 65


>AF106574-1|AAY44015.1|  317|Caenorhabditis elegans Hypothetical
           protein E02D9.1c protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 540 GSGRTFGRPINGQGEIVGVSSQYGAYTDWQAS*GLFVHPGELLPHQ 677
           G G   G P  G G   G    Y  Y  + A+ G  ++PG+  P Q
Sbjct: 20  GGGHGGGYPQEGYGAAAGGYGGYDPYNPYGAAGGYGMYPGQGYPPQ 65


>AF016682-11|AAB66190.2|  270|Caenorhabditis elegans Hypothetical
           protein T07D3.1 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 95  SEKTEAAKNEFVTCGSILKLINTDLKLRLHSHDVKYG 205
           S+ TE    +F+  G  ++L N DLKL L +  V  G
Sbjct: 55  SDDTEPTWEKFIEGGKSIQLCNNDLKLVLENRRVTLG 91


>AF038622-4|AAB94150.1|  337|Caenorhabditis elegans Hypothetical
           protein R07C12.1 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 728 MVLWYSFKIL*LCMYSMLMW**FSRMNKETLTCLPVSVSTIL*THSDNLALTI 570
           M L + FKI+         +  F     ETL CLP    TIL  +S++L  ++
Sbjct: 1   MKLKFKFKIISEIFQENFRFIFFKLYISETLECLPADPKTILFAYSNDLEASV 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,237,568
Number of Sequences: 27780
Number of extensions: 414980
Number of successful extensions: 1106
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)