Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0928
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   4.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = -3

Query: 485 ELIILCGVFAVVFLSLNMWLSVLEYCH 405
           ++ I C +F V+ L ++ +L+ + +C+
Sbjct: 131 QIFITCELFFVILLWISFFLNFMLHCN 157


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 140 NIAGRSGNWTSETSPTFCLKA 202
           NI+  +G W  E    +C KA
Sbjct: 17  NISALNGAWRWECKSNYCQKA 37


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 48  VRSARWMRISCSSMY 4
           V +  WM +SCSS +
Sbjct: 405 VNAGMWMWLSCSSFF 419


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +2

Query: 587 NFNNKIDLEXLFXTFHGICNTNAEKQSLCPHNYE 688
           +FN  +         H +C TN    S  PH  E
Sbjct: 240 HFNRYLTRRRRIEIAHALCLTNKNLVSKPPHEVE 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,328
Number of Sequences: 336
Number of extensions: 4208
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)