Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0928
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0690 - 5903578-5904567,5905269-5905468,5905562-5906618           31   0.89 
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752...    31   1.6  
09_06_0287 + 22047404-22048409,22048754-22049967                       29   6.3  

>12_01_0690 - 5903578-5904567,5905269-5905468,5905562-5906618
          Length = 748

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 15/61 (24%), Positives = 27/61 (44%)
 Frame = -3

Query: 488 GELIILCGVFAVVFLSLNMWLSVLEYCHTKMIYLSG*DGYSVRFSFSCHHIHKVLLHNTM 309
           G   +  G ++ VF S   W++  + CH + ++  G DG         HH+    +H  +
Sbjct: 59  GSFNVTAGDYSTVFRS---WVAGADCCHWEGVHCDGADGRVTSLDLGGHHLQADSVHPAL 115

Query: 308 F 306
           F
Sbjct: 116 F 116


>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
            7526206-7526295,7526404-7526553,7527333-7528094,
            7528177-7528496,7528581-7528707,7528792-7528959,
            7529054-7530466,7530563-7530823,7530983-7531144,
            7531976-7532121,7532601-7532667,7533483-7533587
          Length = 1707

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = -1

Query: 172  TGPITTATSYIELKGSVLVNPLSNYHIR 89
            +G +++A+ +IE++ S +VNP + YHI+
Sbjct: 1628 SGKLSSASVFIEMEMSYMVNPQTGYHIQ 1655


>09_06_0287 + 22047404-22048409,22048754-22049967
          Length = 739

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = +2

Query: 11  EEHDIRIQRADRTMPEPPPEQSTSTKSNVVVAKR 112
           + + +R++R + + P+PPP Q     + V++A++
Sbjct: 207 DSYQVRLRRLNPSPPQPPPPQGAGDPTVVLIAEQ 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,682,587
Number of Sequences: 37544
Number of extensions: 415726
Number of successful extensions: 987
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)