Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0927
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   4.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   7.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   7.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 343 GVRRPHLRVGGRR 381
           GVR P+LRVGG +
Sbjct: 291 GVRAPYLRVGGNK 303


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 343 GVRRPHLRVGGRR 381
           GVR P+LRVGG +
Sbjct: 298 GVRAPYLRVGGNK 310


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 343 GVRRPHLRVGG 375
           GVR P+LRVGG
Sbjct: 299 GVRAPYLRVGG 309


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 411 EMRSWRNRNASASTDTKMW 355
           E   W  +  SAS DT++W
Sbjct: 518 EAALWTEQADSASVDTRLW 536


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 700 VEGGSRCPAASNLGNGG 650
           V GG  CPA   + N G
Sbjct: 151 VAGGFTCPAPGEVSNSG 167


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 700 VEGGSRCPAASNLGNGG 650
           V GG  CPA   + N G
Sbjct: 151 VAGGFTCPAPGEVSNSG 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,159
Number of Sequences: 336
Number of extensions: 2536
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)