Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0927
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0514 - 22876264-22878567                                         31   1.6  
05_06_0230 + 26585439-26586608                                         29   4.9  
04_01_0566 + 7250644-7250985                                           29   4.9  
04_03_0117 - 11461460-11462755                                         29   6.5  
01_03_0119 + 12709976-12710057,12710157-12710230,12710312-127108...    28   8.6  

>01_05_0514 - 22876264-22878567
          Length = 767

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -3

Query: 381 SASTDTKMWSSNSVMKLHSTTGFSSLCVGGAAGWWXCVRRIAERRQRE 238
           SA+T    WS  ++  ++S  G  S+C  G+     C++   ER+ R+
Sbjct: 220 SAATWVLFWSEPTLCDVYSLCGSFSVCTDGSVPECGCLQGFVERQPRQ 267


>05_06_0230 + 26585439-26586608
          Length = 389

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 388 PVPPRPHLLLPQREGASGPDARQQVVGXXRRLHQLAPPGSV 510
           P PP P LLLP+   A GP     V+   R      PPG+V
Sbjct: 20  PSPPLPWLLLPR---ADGPPTFSCVLSGCRSHRFFIPPGAV 57


>04_01_0566 + 7250644-7250985
          Length = 113

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 373 GRRSIPVPPRP-HLLLPQREGASGPDARQQ 459
           GRR  P  PRP  LL+P R  +S P  RQQ
Sbjct: 32  GRRQQPPRPRPPALLVPFRARSSSPHRRQQ 61


>04_03_0117 - 11461460-11462755
          Length = 431

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = -1

Query: 77  GVVEPLPQRLELRREQHGARDAAHR 3
           GV EPL  RLEL   +HGAR A HR
Sbjct: 373 GVPEPL--RLELCAGEHGARRANHR 395


>01_03_0119 +
           12709976-12710057,12710157-12710230,12710312-12710809,
           12711520-12712095,12712181-12712288,12712349-12712393,
           12712614-12713342
          Length = 703

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 615 HPAEARVQLRXGPPLPKLLAAGHLXPPSTKVTVAPFLLA 731
           H ++ +VQLR   PL K LA G + P     T   FL++
Sbjct: 185 HASDPKVQLRNPIPLKKELADGSMMPVKYPHTSQKFLIS 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,421,799
Number of Sequences: 37544
Number of extensions: 357076
Number of successful extensions: 1314
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)