Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0927
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated... 85 4e-16
BC108274-1|AAI08275.1| 191|Homo sapiens KIAA1109 protein protein. 85 4e-16
BC045783-1|AAH45783.1| 191|Homo sapiens KIAA1109 protein protein. 85 4e-16
BC018094-1|AAH18094.2| 191|Homo sapiens KIAA1109 protein protein. 85 4e-16
AL137532-1|CAB70795.1| 761|Homo sapiens hypothetical protein pr... 85 4e-16
AB029032-1|BAA83061.2| 3086|Homo sapiens KIAA1109 protein protein. 85 4e-16
BT007349-1|AAP36013.1| 606|Homo sapiens nucleoporin 98kDa protein. 32 3.2
BC012906-1|AAH12906.1| 606|Homo sapiens NUP98 protein protein. 32 3.2
AF231130-1|AAL56659.1| 1800|Homo sapiens NUP196 nucleoporin prot... 32 3.2
AF116074-1|AAF19342.1| 420|Homo sapiens ADIR2 protein. 32 3.2
M86258-1|AAB59398.1| 283|Homo sapiens calpastatin protein. 30 9.6
M86257-1|AAA52759.2| 317|Homo sapiens calpastatin protein. 30 9.6
D80004-1|BAA11499.1| 1157|Homo sapiens KIAA0182 protein. 30 9.6
D16217-1|BAA03747.1| 708|Homo sapiens calpastatin protein. 30 9.6
BX538020-1|CAD97966.1| 1510|Homo sapiens hypothetical protein pr... 30 9.6
BT009783-1|AAP88785.1| 667|Homo sapiens calpastatin protein. 30 9.6
BC078149-1|AAH78149.1| 592|Homo sapiens CAST protein protein. 30 9.6
BC037556-1|AAH37556.1| 1113|Homo sapiens KIAA0182 protein protein. 30 9.6
BC013579-1|AAH13579.1| 667|Homo sapiens CAST protein protein. 30 9.6
AF071076-1|AAD22395.1| 1712|Homo sapiens Nup98-Nup96 precursor p... 30 9.6
AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein. 30 9.6
AB023164-1|BAA76791.3| 2330|Homo sapiens KIAA0947 protein protein. 30 9.6
>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
protein protein.
Length = 5005
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 511 TQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGTWX 690
T D+RD+ C TWHLEPT+RL+SW G+ I+P G DYILQKLGF +AR P LQ G
Sbjct: 4916 TVDWRDFMCNTWHLEPTLRLISWTGRKIDPVGVDYILQKLGFHHART-TIPKWLQRGVMD 4974
Query: 691 PLRQRLLSL 717
PL ++LS+
Sbjct: 4975 PL-DKVLSV 4982
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 RTXHHQPAAPPTHNDE--KPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
++ H Q P+ D KP VECS +TEF DHI V++DAE +FLHDL+S+YLKEKE+
Sbjct: 4820 KSIHVQEPQEPSLQDASLKPKVECSVVTEFTDHICVTMDAELIMFLHDLVSAYLKEKEKA 4879
Query: 440 AQMP 451
P
Sbjct: 4880 IFPP 4883
>BC108274-1|AAI08275.1| 191|Homo sapiens KIAA1109 protein protein.
Length = 191
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 511 TQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGTWX 690
T D+RD+ C TWHLEPT+RL+SW G+ I+P G DYILQKLGF +AR P LQ G
Sbjct: 102 TVDWRDFMCNTWHLEPTLRLISWTGRKIDPVGVDYILQKLGFHHART-TIPKWLQRGVMD 160
Query: 691 PLRQRLLSL 717
PL ++LS+
Sbjct: 161 PL-DKVLSV 168
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 RTXHHQPAAPPTHNDE--KPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
++ H Q P+ D KP VECS +TEF DHI V++DAE +FLHDL+S+YLKEKE+
Sbjct: 6 KSIHVQEPQEPSLQDASLKPKVECSVVTEFTDHICVTMDAELIMFLHDLVSAYLKEKEKA 65
Query: 440 AQMP 451
P
Sbjct: 66 IFPP 69
>BC045783-1|AAH45783.1| 191|Homo sapiens KIAA1109 protein protein.
Length = 191
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 511 TQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGTWX 690
T D+RD+ C TWHLEPT+RL+SW G+ I+P G DYILQKLGF +AR P LQ G
Sbjct: 102 TVDWRDFMCNTWHLEPTLRLISWTGRKIDPVGVDYILQKLGFHHART-TIPKWLQRGVMD 160
Query: 691 PLRQRLLSL 717
PL ++LS+
Sbjct: 161 PL-DKVLSV 168
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 RTXHHQPAAPPTHNDE--KPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
++ H Q P+ D KP VECS +TEF DHI V++DAE +FLHDL+S+YLKEKE+
Sbjct: 6 KSIHVQEPQEPSLQDASLKPKVECSVVTEFTDHICVTMDAELIMFLHDLVSAYLKEKEKA 65
Query: 440 AQMP 451
P
Sbjct: 66 IFPP 69
>BC018094-1|AAH18094.2| 191|Homo sapiens KIAA1109 protein protein.
Length = 191
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 511 TQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGTWX 690
T D+RD+ C TWHLEPT+RL+SW G+ I+P G DYILQKLGF +AR P LQ G
Sbjct: 102 TVDWRDFMCNTWHLEPTLRLISWTGRKIDPVGVDYILQKLGFHHART-TIPKWLQRGVMD 160
Query: 691 PLRQRLLSL 717
PL ++LS+
Sbjct: 161 PL-DKVLSV 168
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 RTXHHQPAAPPTHNDE--KPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
++ H Q P+ D KP VECS +TEF DHI V++DAE +FLHDL+S+YLKEKE+
Sbjct: 6 KSIHVQEPQEPSLQDASLKPKVECSVVTEFTDHICVTMDAELIMFLHDLVSAYLKEKEKA 65
Query: 440 AQMP 451
P
Sbjct: 66 IFPP 69
>AL137532-1|CAB70795.1| 761|Homo sapiens hypothetical protein
protein.
Length = 761
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 511 TQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGTWX 690
T D+RD+ C TWHLEPT+RL+SW G+ I+P G DYILQKLGF +AR P LQ G
Sbjct: 672 TVDWRDFMCNTWHLEPTLRLISWTGRKIDPVGVDYILQKLGFHHART-TIPKWLQRGVMD 730
Query: 691 PLRQRLLSL 717
PL ++LS+
Sbjct: 731 PL-DKVLSV 738
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 RTXHHQPAAPPTHNDE--KPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
++ H Q P+ D KP VECS +TEF DHI V++DAE +FLHDL+S+YLKEKE+
Sbjct: 576 KSIHVQEPQEPSLQDASLKPKVECSVVTEFTDHICVTMDAELIMFLHDLVSAYLKEKEKA 635
Query: 440 AQMP 451
P
Sbjct: 636 IFPP 639
>AB029032-1|BAA83061.2| 3086|Homo sapiens KIAA1109 protein protein.
Length = 3086
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 511 TQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGTWX 690
T D+RD+ C TWHLEPT+RL+SW G+ I+P G DYILQKLGF +AR P LQ G
Sbjct: 2997 TVDWRDFMCNTWHLEPTLRLISWTGRKIDPVGVDYILQKLGFHHART-TIPKWLQRGVMD 3055
Query: 691 PLRQRLLSL 717
PL ++LS+
Sbjct: 3056 PL-DKVLSV 3063
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 RTXHHQPAAPPTHNDE--KPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
++ H Q P+ D KP VECS +TEF DHI V++DAE +FLHDL+S+YLKEKE+
Sbjct: 2901 KSIHVQEPQEPSLQDASLKPKVECSVVTEFTDHICVTMDAELIMFLHDLVSAYLKEKEKA 2960
Query: 440 AQMP 451
P
Sbjct: 2961 IFPP 2964
>BT007349-1|AAP36013.1| 606|Homo sapiens nucleoporin 98kDa protein.
Length = 606
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 481 LHQLAPPGSVTQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYG 606
L+QL P S+T D DYR +WHL +R L++ S + G
Sbjct: 295 LNQLLEPRSITADPLDYR-LSWHLWEVLRALNYTHLSAQCEG 335
>BC012906-1|AAH12906.1| 606|Homo sapiens NUP98 protein protein.
Length = 606
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 481 LHQLAPPGSVTQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYG 606
L+QL P S+T D DYR +WHL +R L++ S + G
Sbjct: 295 LNQLLEPRSITADPLDYR-LSWHLWEVLRALNYTHLSAQCEG 335
>AF231130-1|AAL56659.1| 1800|Homo sapiens NUP196 nucleoporin protein.
Length = 1800
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 481 LHQLAPPGSVTQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYG 606
L+QL P S+T D DYR +WHL +R L++ S + G
Sbjct: 1489 LNQLLEPRSITADPLDYR-LSWHLWEVLRALNYTHLSAQCEG 1529
>AF116074-1|AAF19342.1| 420|Homo sapiens ADIR2 protein.
Length = 420
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 481 LHQLAPPGSVTQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYG 606
L+QL P S+T D DYR +WHL +R L++ S + G
Sbjct: 295 LNQLLEPRSITADPLDYR-LSWHLWEVLRALNYTHLSAQCEG 335
>M86258-1|AAB59398.1| 283|Homo sapiens calpastatin protein.
Length = 283
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 373 GRRSIPVPPRPHLLLPQREGASGPDA 450
G+R + +PP+ LL ++EG +GP A
Sbjct: 195 GKREVTIPPKYRELLAKKEGITGPPA 220
>M86257-1|AAA52759.2| 317|Homo sapiens calpastatin protein.
Length = 317
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 373 GRRSIPVPPRPHLLLPQREGASGPDA 450
G+R + +PP+ LL ++EG +GP A
Sbjct: 195 GKREVTIPPKYRELLAKKEGITGPPA 220
>D80004-1|BAA11499.1| 1157|Homo sapiens KIAA0182 protein.
Length = 1157
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 445 DARQQVVGXXRRLHQLAPPGSVTQDY-RDYRCXTWHLEPTVRLLSWAGKSIEP 600
D+R + R +H + PP +VT+DY R +R +H +R+ S ++P
Sbjct: 133 DSRFPPLNLQRPVHHVVPPSTVTEDYLRSFR--PYHTTDDLRMSSLPPLGLDP 183
>D16217-1|BAA03747.1| 708|Homo sapiens calpastatin protein.
Length = 708
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 373 GRRSIPVPPRPHLLLPQREGASGPDA 450
G+R + +PP+ LL ++EG +GP A
Sbjct: 195 GKREVTIPPKYRELLAKKEGITGPPA 220
>BX538020-1|CAD97966.1| 1510|Homo sapiens hypothetical protein
protein.
Length = 1510
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 627 ARVQLRXGPPLPKLLAAGHLXPPSTKVTVAPFLLAGS 737
++++ GPPLP LLA PP T ++P + + S
Sbjct: 866 SKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSS 902
>BT009783-1|AAP88785.1| 667|Homo sapiens calpastatin protein.
Length = 667
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 373 GRRSIPVPPRPHLLLPQREGASGPDA 450
G+R + +PP+ LL ++EG +GP A
Sbjct: 154 GKREVTIPPKYRELLAKKEGITGPPA 179
>BC078149-1|AAH78149.1| 592|Homo sapiens CAST protein protein.
Length = 592
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 373 GRRSIPVPPRPHLLLPQREGASGPDA 450
G+R + +PP+ LL ++EG +GP A
Sbjct: 119 GKREVTIPPKYRELLAKKEGITGPPA 144
>BC037556-1|AAH37556.1| 1113|Homo sapiens KIAA0182 protein protein.
Length = 1113
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 445 DARQQVVGXXRRLHQLAPPGSVTQDY-RDYRCXTWHLEPTVRLLSWAGKSIEP 600
D+R + R +H + PP +VT+DY R +R +H +R+ S ++P
Sbjct: 89 DSRFPPLNLQRPVHHVVPPSTVTEDYLRSFR--PYHTTDDLRMSSLPPLGLDP 139
>BC013579-1|AAH13579.1| 667|Homo sapiens CAST protein protein.
Length = 667
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 373 GRRSIPVPPRPHLLLPQREGASGPDA 450
G+R + +PP+ LL ++EG +GP A
Sbjct: 154 GKREVTIPPKYRELLAKKEGITGPPA 179
>AF071076-1|AAD22395.1| 1712|Homo sapiens Nup98-Nup96 precursor
protein.
Length = 1712
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 481 LHQLAPPGSVTQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYG 606
L+QL P S+T D DYR +WHL +R L + S + G
Sbjct: 1489 LNQLLEPRSITADPLDYR-LSWHLWEVLRDLKYTHLSAQCEG 1529
>AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein.
Length = 519
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 364 RVGGRRSIPVPPRPHLLLPQREGA--SGPDARQQV 462
R GG IPVP P L +P GA +GP QQV
Sbjct: 36 RAGGAAVIPVPEEPALPVPGGRGAGEAGPRRTQQV 70
>AB023164-1|BAA76791.3| 2330|Homo sapiens KIAA0947 protein protein.
Length = 2330
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 627 ARVQLRXGPPLPKLLAAGHLXPPSTKVTVAPFLLAGS 737
++++ GPPLP LLA PP T ++P + + S
Sbjct: 1686 SKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSS 1722
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,146,886
Number of Sequences: 237096
Number of extensions: 1772865
Number of successful extensions: 6590
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6590
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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