Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0927
         (878 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA...    96   7e-20
AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown prot...    64   3e-10
AY118495-1|AAM49864.1| 1002|Drosophila melanogaster LD06146p pro...    30   3.7  
AF071502-1|AAC28454.1| 1209|Drosophila melanogaster brahma assoc...    30   3.7  
AF033823-1|AAD12718.1| 1189|Drosophila melanogaster moira protein.     30   3.7  
AE014297-2128|AAF55259.3| 1209|Drosophila melanogaster CG18740-P...    30   3.7  

>AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA
            protein.
          Length = 1876

 Score = 95.9 bits (228), Expect = 7e-20
 Identities = 49/87 (56%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +1

Query: 505  SVTQDYRDYRCXTWHLEPTVRLLSWAGKSIEPYGXDYILQKLGFSYARDHHYPSCLQXGT 684
            S  +D+R + C TWHLEPTVRLLSWAGKSIEPYG DYIL KLGFS+AR    P  LQ G 
Sbjct: 1772 SFVRDWRHFECQTWHLEPTVRLLSWAGKSIEPYGVDYILNKLGFSHART-TIPKWLQRGF 1830

Query: 685  WXPLR--QRLLSLRFCLXARSAIIARN 759
              PL   Q L+ L+  L  R   + R+
Sbjct: 1831 MDPLDKVQALMMLQLLLMVRENKVERD 1857



 Score = 81.8 bits (193), Expect = 1e-15
 Identities = 36/58 (62%), Positives = 45/58 (77%)
 Frame = +2

Query: 266  RTXHHQPAAPPTHNDEKPVVECSFITEFEDHIFVSVDAEAFLFLHDLISSYLKEKERV 439
            +T H Q    P  ++ KP V CSFITEF+DHIFV+VDA+AF FLHDLI+SY+ EKE+V
Sbjct: 1592 KTEHKQGPTTPEPSENKPEVLCSFITEFDDHIFVTVDADAFFFLHDLITSYVTEKEKV 1649



 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = +3

Query: 6    VCRITRTVLFPPQFKTLREWFHYAFANSEIDAIELFPSLEKE 131
            V RITR ++FPPQFKTL EWFHYAFANSEIDA++ FP LE E
Sbjct: 1508 VSRITRNIIFPPQFKTLNEWFHYAFANSEIDAVDRFPMLECE 1549


>AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown protein.
          Length = 1192

 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +3

Query: 6    VCRITRTVLFPPQFKTLREWFHYAFANSEID 98
            V RITR ++FPPQFKTL EWFHYAFANSEID
Sbjct: 1122 VSRITRNIIFPPQFKTLNEWFHYAFANSEID 1152


>AY118495-1|AAM49864.1| 1002|Drosophila melanogaster LD06146p protein.
          Length = 1002

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 355  PHLRVGGRRSIPVPPRPHLLLPQREGASGPDARQQ-----VVGXXRRLHQLAPPGSVT 513
            PH  +  ++ +P  P PH L PQ +  +GP A+ Q     VV         APP S+T
Sbjct: 871  PHPHLAQQQQLP--PHPHQLPPQSQPLAGPTAQHQPLPPHVVSSPNGAPFAAPPISLT 926


>AF071502-1|AAC28454.1| 1209|Drosophila melanogaster brahma associated
            protein 155 kDa protein.
          Length = 1209

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 355  PHLRVGGRRSIPVPPRPHLLLPQREGASGPDARQQ-----VVGXXRRLHQLAPPGSVT 513
            PH  +  ++ +P  P PH L PQ +  +GP A+ Q     VV         APP S+T
Sbjct: 1078 PHPHLAQQQQLP--PHPHQLPPQSQPLAGPTAQHQPLPPHVVSSPNGAPFAAPPISLT 1133


>AF033823-1|AAD12718.1| 1189|Drosophila melanogaster moira protein.
          Length = 1189

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 355  PHLRVGGRRSIPVPPRPHLLLPQREGASGPDARQQ-----VVGXXRRLHQLAPPGSVT 513
            PH  +  ++ +P  P PH L PQ +  +GP A+ Q     VV         APP S+T
Sbjct: 1058 PHPHLAQQQQLP--PHPHQLPPQSQPLAGPTAQHQPLPPHVVSSPNGAPFAAPPISLT 1113


>AE014297-2128|AAF55259.3| 1209|Drosophila melanogaster CG18740-PA
            protein.
          Length = 1209

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 355  PHLRVGGRRSIPVPPRPHLLLPQREGASGPDARQQ-----VVGXXRRLHQLAPPGSVT 513
            PH  +  ++ +P  P PH L PQ +  +GP A+ Q     VV         APP S+T
Sbjct: 1078 PHPHLAQQQQLP--PHPHQLPPQSQPLAGPTAQHQPLPPHVVSSPNGAPFAAPPISLT 1133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,402,457
Number of Sequences: 53049
Number of extensions: 546783
Number of successful extensions: 1574
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)