Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0927
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23651-11|AAA27959.1|  250|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>L23651-11|AAA27959.1|  250|Caenorhabditis elegans Hypothetical
           protein C29E4.7 protein.
          Length = 250

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 269 TXHHQPAAPPTHNDEKPVVECSFITEFEDHIF 364
           T H+Q  AP   ++ K V+E  FI E+ D  F
Sbjct: 66  TKHYQGKAPAVEHNGKVVIESGFIPEYLDDAF 97


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +2

Query: 281 QPAAPPTHNDEKPVVE---CSFITEFEDHIFVSV 373
           +P  PP   D  PV     C F T F+D I VS+
Sbjct: 498 EPPQPPRPEDIAPVSHPRPCQFSTSFDDEIVVSI 531


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,292,721
Number of Sequences: 27780
Number of extensions: 252350
Number of successful extensions: 635
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)