Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0926
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    26   0.27 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.62 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   5.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.6  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 231 VLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFPPVPLWLVKSP 67
           VL + M  +EP    P++     PGP      F  +N LP    PP+PL  + +P
Sbjct: 143 VLNLTMPKYEP---NPSII---DPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAP 191


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 99  ESPSTAISLKTR---ISPLSTLDLASSPWLMPV 188
           ESP  A  L  R   I  +ST+DL SS W +P+
Sbjct: 373 ESPPAADELLRRFHEIRYMSTIDLRSSYWQIPL 405


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 541 FPCILVMFIVAFLLITF*FY 600
           F C  ++F V FLL T+ FY
Sbjct: 85  FYCPFIIFTVHFLLCTYYFY 104


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -1

Query: 540 LMPIPSSLHQYNILLNN-WNDPYF 472
           L P+PSS+H ++ + N+ +N P +
Sbjct: 399 LSPLPSSVHSHSTIGNDYYNSPLY 422


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 231 VLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFPPVPL 85
           VL + M  +EP    P++     PGP      F  +N  P    PP+PL
Sbjct: 143 VLNLTMPKYEP---NPSII---DPGPALPPTGFLCNNYPPLPQVPPLPL 185


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 552 YAWKLMPIPSSLHQYNILLNNWNDPYFI*IILYWEGIFIYQEDLVFN 412
           +A K+  +  S+ + N++ N +     I IILY   + +   D VFN
Sbjct: 190 FAKKMEGLVCSIKELNMIFNEFFGWPIIMIILYSSLMVLNYIDEVFN 236


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 53  FMLQGGDFTNHNGTGGKSIYGNKF-EDENFTL 145
           F + GGDF    G+G   +YG  +   EN  L
Sbjct: 78  FWIHGGDFV--TGSGTSEMYGPDYLMSENVVL 107


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 718 FFPVNIIYLCTK 683
           FF VN++Y+C +
Sbjct: 278 FFIVNVLYICNQ 289


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 550 ILVMFIVAFLLIT 588
           +L+MF V+FL+IT
Sbjct: 244 LLLMFAVSFLIIT 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,865
Number of Sequences: 336
Number of extensions: 4058
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)